Gene Shewana3_3508 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagShewana3_3508 
Symbol 
ID4479292 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameShewanella sp. ANA-3 
KingdomBacteria 
Replicon accessionNC_008577 
Strand
Start bp4208927 
End bp4209316 
Gene Length390 bp 
Protein Length129 aa 
Translation table11 
GC content50% 
IMG OID639728117 
Productputative thiol-disulphide oxidoreductase DCC 
Protein accessionYP_871137 
Protein GI117921945 
COG category[S] Function unknown 
COG ID[COG3011] Uncharacterized protein conserved in bacteria 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones15 
Plasmid unclonability p-value0.281099 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones46 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGGAACTGC GAATTTTTTA CGACGGCAAT TGCCCTTTAT GTCGCGCCGA AATGCGCCAG 
CTTAAAGCGC GCGATCCCGA TGATCGCATC GAACTTGTGG ATCTTAATGC CGAGCATTTT
AGCTCTCGAT TCGGCTATAT CGATAAAGAG TATGCCAACA CCATTCTTCA TGGTGAAACG
GCGACAGGAG AGATTTTGCT TGGGCTCGAT GTCACCTGCA AAGCCTGGGG ATTAACGGGC
ACTCGCCCTT GGGTACAAGT GCTACGCTTA CCGCTTATCA AACCTATCGC GGATTGGTGC
TACCTGAGAT TCGCCAAGCA CAGATACCGC ATCTCTTACT TACTGACGGG CAAGTCGCGC
TGTGACAATC AATGCCAACT GCCTAAGTAA
 
Protein sequence
MELRIFYDGN CPLCRAEMRQ LKARDPDDRI ELVDLNAEHF SSRFGYIDKE YANTILHGET 
ATGEILLGLD VTCKAWGLTG TRPWVQVLRL PLIKPIADWC YLRFAKHRYR ISYLLTGKSR
CDNQCQLPK