| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Shewana3_3472 |
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| Symbol | |
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| ID | 4479256 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Shewanella sp. ANA-3 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_008577 |
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| Strand | - |
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| Start bp | 4163810 |
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| End bp | 4165771 |
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| Gene Length | 1962 bp |
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| Protein Length | 653 aa |
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| Translation table | 11 |
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| GC content | 50% |
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| IMG OID | 639728081 |
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| Product | TonB-dependent siderophore receptor |
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| Protein accession | YP_871101 |
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| Protein GI | 117921909 |
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| COG category | [H] Coenzyme transport and metabolism |
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| COG ID | [COG4206] Outer membrane cobalamin receptor protein |
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| TIGRFAM ID | [TIGR01783] TonB-dependent siderophore receptor |
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Plasmid Coverage information |
| Num covering plasmid clones | 7 |
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| Plasmid unclonability p-value | 0.0503687 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 30 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGGGAACAC ATCCAACTAA AATCGCGCTG CTGATTGGCA GCCTTTGCAG CTTTTCTGTT
ATCGCCCCCG CCGTGGCGGC CGATGATGCC AGCGTTGCCA AAGTCGATGA GCATATCGTC
GTCATTGGCC GTTCAGACAA GACCCCCTTG AATATTGCCG CCAATGTGAA TGTGATTGAT
GCAGCTGCGA TTGAGCAGAG TGGCGCAACC AGCTTGACCG AAGTCTTACG TGGTCAAAGC
GGTATTCAGC TGTCCGACAA TAACATTGGT ACTAGTTTCG CGATGCGTGG CTTTAGCGCT
AGCTCTGCGG TTAACAACAC CTTGATTTTG CTCGATGGTC GTCGCTTAAA TAATATCGAT
ATCGCCGCGC CTAGCCTGAA TGCGATTCCG CTCAATTTAA TTGAGCGTGT TGAAATTCTA
TCGGGCAGTG CCGGCGTGCT CTATGGCGAC CAAGCGGTAG GCGGGGTGAT TAACATTGTG
ACCAAGTCGC CTGAGAATAC GGGCGGCAGC GTGCAATTAT CCGGCGGCAG CTTTAATACC
TACGAAGGTC GCGGCGATGT GTCGGGCGCC ATCAATAAAG ATTGGCACTA TTTCCTGACC
GGTAGCTACA ACCAAGGCGA TAACTATCGT AAGCATAATG CCAATGAAAC TGGCTCTATC
TTAGGCCGTA TTCAATATAA AACCGCCACA GATTCTTTCT TCGTTGAAAC CAGCTATTAC
GATGATGACC GCGAGAATCC TGGGGCGTTG ACCCCTAAGC AGTTCAAAGA AAATCCACGT
CAGTCTTCTA ATAGCAGCGA ATATGTTCAT GAGATGACCA CTGCGGCGCG CAGCGGTTAT
CAGCATCAGC TTAACCAAAA CTGGGCCTTG GCGGCGGATC TGGATTACAG CGATACCTTA
GTGAGCTCAT TAAACTGGGG AGCGGGCAGC CATAATACTC GCTCGCTGCT GATGTTTAGT
CCTAAAGCGC TTGCTAATTA CAGCACCCGT CAAGGTGAGC TAAATCTAGT CACAGGTTTG
GATATCAGCC GCGGTAAGGC AGAGTTTGAC TCTATGGCGC GCAGCAACGT GCAGGAAATG
CAGAGTGCTT ACCTGCAAGC CACAGTGCCA TTAAGCCACA CCTTAAGCTA TGTGGTGGGC
GGACGTTATG CGCGGGTGAC CGACGATCTG GTCGATGGCA ATGTGTATCC AAACGGTATC
GATTTAGATG AAGATGCGAC CGCATTCGAG TTCGGTTTAA ATTACCGTCC GAGCGCCGAG
CACAGATTCT ATCTGCGTGG TGATGAAAAC TTCCGTTTCG CTAAGGTCGA TGAGCAAGCT
TACACCCCGA AAGATGTGTA TGGCTTAAAG CCGCAGACGG GCCGCTCCTA CGAGGCTGGT
TGGGATTGGA CTGTTGCTAG CCAAAGCCTA CGCGTCAGCC TATATCGTCT CGATTTAGAA
GATGAAATCG TCTTCGACCC GAGTGCTGAA AAACCTGTTG GTGGCAGCTT CCAAGGCGCC
AACGTCAATG CCGATGCTTC ACGTCGCTAT GGCGCGAGTG CCGATTGGGA TTGGCAGGTC
ACTCAAGCCC TTACCTTAGG TTTGGAATAT AACTATATCG ATGCCGAATT TACCGATGGG
GTGAATGATG GCAAGCAATT GTCTTGGGTG GCTGAGCATA CGGGACGCGG TTACGTTAGC
ATGGATTTTG CCGAGCATTT CCAAGTGTTT GCCGAGGCGA TTTACACGGG CGATCGTTTT
ATCGAAGGCG ATAACGCTAA CCAAGGCGAT AAATTATCTA GCTATGTTTT AGGTAATCTG
GCCCTGAACT ATACCCGTGA CGCTTGGTTA GCGAGCCTGC GTATCGATAA CCTGTTTGAT
AAAGAGTATG TCAGTTCTGG CTATTATGCT GGTGGAGAAT ATGACGGCTA TTACACGGGC
CGAGGTCGTG ATATTCGCTT GACTGTGGGT TACCGCTTCT AA
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| Protein sequence | MGTHPTKIAL LIGSLCSFSV IAPAVAADDA SVAKVDEHIV VIGRSDKTPL NIAANVNVID
AAAIEQSGAT SLTEVLRGQS GIQLSDNNIG TSFAMRGFSA SSAVNNTLIL LDGRRLNNID
IAAPSLNAIP LNLIERVEIL SGSAGVLYGD QAVGGVINIV TKSPENTGGS VQLSGGSFNT
YEGRGDVSGA INKDWHYFLT GSYNQGDNYR KHNANETGSI LGRIQYKTAT DSFFVETSYY
DDDRENPGAL TPKQFKENPR QSSNSSEYVH EMTTAARSGY QHQLNQNWAL AADLDYSDTL
VSSLNWGAGS HNTRSLLMFS PKALANYSTR QGELNLVTGL DISRGKAEFD SMARSNVQEM
QSAYLQATVP LSHTLSYVVG GRYARVTDDL VDGNVYPNGI DLDEDATAFE FGLNYRPSAE
HRFYLRGDEN FRFAKVDEQA YTPKDVYGLK PQTGRSYEAG WDWTVASQSL RVSLYRLDLE
DEIVFDPSAE KPVGGSFQGA NVNADASRRY GASADWDWQV TQALTLGLEY NYIDAEFTDG
VNDGKQLSWV AEHTGRGYVS MDFAEHFQVF AEAIYTGDRF IEGDNANQGD KLSSYVLGNL
ALNYTRDAWL ASLRIDNLFD KEYVSSGYYA GGEYDGYYTG RGRDIRLTVG YRF
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