Gene Shewana3_3449 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagShewana3_3449 
Symbol 
ID4476792 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameShewanella sp. ANA-3 
KingdomBacteria 
Replicon accessionNC_008577 
Strand
Start bp4132077 
End bp4132910 
Gene Length834 bp 
Protein Length277 aa 
Translation table11 
GC content38% 
IMG OID639728058 
Producthypothetical protein 
Protein accessionYP_871078 
Protein GI117921886 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones24 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones12 
Fosmid unclonability p-value0.00898971 
Fosmid HitchhikerYes 
Fosmid clonabilityhitchhiker 
 

Sequence

Gene sequence
GTGTCGTGGT CGCGTGCTTC ACACCTTAAT TGGGCGTTAT GTGCTAGGGG CAGTCAGGAG 
TTTTTTAAAA TGAGCATTCA GTTGAAGTTA GTTCATCTTC GAAAGAAAAT TAGAGCAAAT
AAGAAGAAAG TCACTGATGC AATCATTGCA AATCATTCGG CAGAAATTTG CATTATTTGT
GGTTCTCACG AGCAATTGAC CAAAGAGCAC GTTATACCCC AGTGGGTTTA TAATCGCTGT
ACAAAGCGTA CTTTTGAAAC AACTACTAAC GGTATTTCGC AAACTTACAA TAAAACCACG
CTGCCAGCAT GCAAAGATTG TAATTCAAAT CTCCTTGGCT TATTGGAACG GCATTTAAAA
CATGAATTTG AAAGAATAGA TGTTCGTCAT CAAGAGTTTC CCCAAGAAAC TTTAGATCTA
GTCATATTGT GGTTAGAGAC TCTAGAGTAT AAGTTTCAGG TTCTTGATCT TCGGCGAAAT
TTAAACAAAG CAAAAGGTGC TGATTACATT CCTTATATAG GTAAAATGCC AATTGCTATG
TTCCAAGGAC CAATGGGAAC TAGTCCTGCA AAGGTTTTCT CAAACCTTCG TTCTGCTTTA
AACGTTTTAA GCGTAAAATC TAAGGCGGAT AGGCTTAACT CTCTCTGTGT AATCCATACC
AAAAACAAAG ATTTTCATTT CTTTCACTCG ACAAATAACT ATATTTTCAT CGAGTTAGCC
AAATTTGGTG TTGCTTTTTT CTACTTCTAT AAACAATCAT TTGATAATGT TGCCGAAGCA
GTAGAGTCCG CCAAGGACAT CGTAAATGAA CAGTATGCGG GAAAAGGCAC ATAA
 
Protein sequence
MSWSRASHLN WALCARGSQE FFKMSIQLKL VHLRKKIRAN KKKVTDAIIA NHSAEICIIC 
GSHEQLTKEH VIPQWVYNRC TKRTFETTTN GISQTYNKTT LPACKDCNSN LLGLLERHLK
HEFERIDVRH QEFPQETLDL VILWLETLEY KFQVLDLRRN LNKAKGADYI PYIGKMPIAM
FQGPMGTSPA KVFSNLRSAL NVLSVKSKAD RLNSLCVIHT KNKDFHFFHS TNNYIFIELA
KFGVAFFYFY KQSFDNVAEA VESAKDIVNE QYAGKGT