Gene Shewana3_3421 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagShewana3_3421 
Symbol 
ID4476764 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameShewanella sp. ANA-3 
KingdomBacteria 
Replicon accessionNC_008577 
Strand
Start bp4097120 
End bp4097791 
Gene Length672 bp 
Protein Length223 aa 
Translation table11 
GC content52% 
IMG OID639728030 
ProductABC transporter related 
Protein accessionYP_871050 
Protein GI117921858 
COG category[V] Defense mechanisms 
COG ID[COG1136] ABC-type antimicrobial peptide transport system, ATPase component 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones27 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones42 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGTCAGAAG TAGCCAAACT TATCCAAGTG AGTAAAAGTT TTCGCGACGG CGAGCAGCGC 
CATACAGTAC TGCAAGCCGT CGATTTAACC TTGCATCGCG GCGAAACCAT CGCACTCACG
GGCCCCAGCG GCAGCGGTAA AAGCACACTG CTAAATTTGA TCGCAGGCTT TGAAACGCCA
GACAGCGGCC AGATAGTGTT GAATAATCAA TCCACCCAAG ATTGGCAAGA CAAACACTGG
AGCGAGTTCA GGCACAACCA TTTGGGCGTG GTGTTTCAAC AATTTAATCT GCTGACTCCG
CTCAATGTGA GAAACAACAT AGGTTTTTCA CTCAATCTCA ACGGCGCCAG TTGGAATCCT
TGGTGCGATT ATCTCGTCGA CAAATTGGGG CTGGCTTCGC TGCTCAATCG GCAGGTCGAA
GCGCTTTCAG GCGGGCAACA GCAAAGGGTC GCTATCGCCA GAGCCTTAGC CCACAACCCG
AGTTTACTGC TGGCCGACGA ACCCACGGGC AACCTCGATG ATGAATCGGG AAAACAGGTG
ATGTCGCTGC TATGCGAACT GGCCAAAGAA AGCCAAACCA GCATACTCAT GGTCACCCAC
AGTGAAGAAT GCGCCGCTTT TATGCACAAG CGCTGGCATC TTTCCCACGC CGCTGTGTCT
ATCTCCGGTT AA
 
Protein sequence
MSEVAKLIQV SKSFRDGEQR HTVLQAVDLT LHRGETIALT GPSGSGKSTL LNLIAGFETP 
DSGQIVLNNQ STQDWQDKHW SEFRHNHLGV VFQQFNLLTP LNVRNNIGFS LNLNGASWNP
WCDYLVDKLG LASLLNRQVE ALSGGQQQRV AIARALAHNP SLLLADEPTG NLDDESGKQV
MSLLCELAKE SQTSILMVTH SEECAAFMHK RWHLSHAAVS ISG