Gene Shewana3_3369 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagShewana3_3369 
Symbol 
ID4478502 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameShewanella sp. ANA-3 
KingdomBacteria 
Replicon accessionNC_008577 
Strand
Start bp4040739 
End bp4041932 
Gene Length1194 bp 
Protein Length397 aa 
Translation table11 
GC content46% 
IMG OID639727979 
Productbeta-lactamase 
Protein accessionYP_870999 
Protein GI117921807 
COG category[V] Defense mechanisms 
COG ID[COG1680] Beta-lactamase class C and other penicillin binding proteins 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones19 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones40 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGCGTTTGA GTGTTATCGG CTCCCTGCTA TCGGGGTTGT TATTACTCCC AAGTGCCAAT 
AGTGTTGGTG AGTCGTTTGA GGCTGCGATT GCGTCGGAAA GCGCGCAAGG CGGTCAGTCA
GTTAAGCTTG AAAGCCAATT GCCATCCTCG GAATCTAAGC TCGGGGAGAT TAAGAGCTTA
ATCCAAGCGG CGATAATGGA TTCGCCGCAG CCATTTAGTG GTAGCGTTAT TCTGCTTGCA
GAGGGGAAAC CACTGCTTGA ATTACAAAAG GGCGAAGGTA TTAGTCAAGA TTCGCGCTTT
GTGATGGCAT CGCTCTCTAA ACAAATTACC GCAACGCTAG TGTTGCAGGC ACTCGATGCA
GGGAAACTCG ATTTAAATCA AACGCTAAAT CATTACCTTT TTGGCGATCT TGACGCGGAA
TCTAAGGCGC TAAAAGCCAT TGATGCGAAC GCCAATGCGG GGGCTTTGAA TCCCAACCGT
TATGATGAAC GCATTACTTT GCACCAACTG CTGAACCATA CATCGGGTGT CGATAAACTG
GGTAAGCCCA ATCGGTTCGT TCCTGGTAAC CAGTTTGAAT ATTCCAATTT AGGTTATTCA
CTGCTTGGAC AAGTGCTTGA GAAGGTGAAT CATCAATCCT TTACCGAGCA GGTGGTACAA
TTTGCTGCGC GATACCAACT TAATGCCCTA AGTGCTGAGC TTGGCAGTAT TGAGGCGATT
CATGCCAAAG TGCCTAGCTT GGCGGTGGGA TTGCAGGAAG GCGAAGTGAT TGCCCCTTCT
GAGCTGGTGA TTGATGAAGC GTTATTGCCC GCAGGGGGAT TGATTGCCTC GCCAGCCACT
TATGCCGCCT TTCAGCAGCA ATTACATACT GGTAAGTTGT TAAGCCCTGA GAGTTATCAA
CGGATGACCA CTGACTATAT CGAGCTACCA TTTTTATGGC CGAATATGCG CTACGGTTAT
GGGATAAGGA TCAATAAGGA CAATGACTTA GTCGAATATA GTCATACGGG TTATGTCTCG
GGTTATATGT CGATGACGCT GCATTATCCC GAATATAATC TGGACTTAGT CATGCTGGAA
AATCTCTCCT TAAACCTTAA CGACCGTAAC CGGGTATTTG AACTGCATAA TCAGATACGT
CAAATCATTC GTAGTCAGTT GCTGCTGACT ACATTATCTC TGCATAAGGT ATAA
 
Protein sequence
MRLSVIGSLL SGLLLLPSAN SVGESFEAAI ASESAQGGQS VKLESQLPSS ESKLGEIKSL 
IQAAIMDSPQ PFSGSVILLA EGKPLLELQK GEGISQDSRF VMASLSKQIT ATLVLQALDA
GKLDLNQTLN HYLFGDLDAE SKALKAIDAN ANAGALNPNR YDERITLHQL LNHTSGVDKL
GKPNRFVPGN QFEYSNLGYS LLGQVLEKVN HQSFTEQVVQ FAARYQLNAL SAELGSIEAI
HAKVPSLAVG LQEGEVIAPS ELVIDEALLP AGGLIASPAT YAAFQQQLHT GKLLSPESYQ
RMTTDYIELP FLWPNMRYGY GIRINKDNDL VEYSHTGYVS GYMSMTLHYP EYNLDLVMLE
NLSLNLNDRN RVFELHNQIR QIIRSQLLLT TLSLHKV