Gene Shewana3_3347 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagShewana3_3347 
Symbol 
ID4477648 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameShewanella sp. ANA-3 
KingdomBacteria 
Replicon accessionNC_008577 
Strand- 
Start bp4015402 
End bp4016151 
Gene Length750 bp 
Protein Length249 aa 
Translation table11 
GC content47% 
IMG OID639727957 
Producttranscriptional regulator 
Protein accessionYP_870977 
Protein GI117921785 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones17 
Plasmid unclonability p-value0.730311 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones28 
Fosmid unclonability p-value1 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGCAAATAG GCGCTTGTTG GTTTAATGCA CAGGAACAAG TGCTGGTTGA TTCGGCTTCA 
GGACGCAGCT GGTTATTGAG TGCGGATGAA TTTCAAATAC TTTCTCTGCT GAGTGCACAG 
CGCGGCAAAG TCGTTTCGCG CATGGAGTTA CAGCAGGCGA TTCGGCCGCA ACTCAAATTG 
CCTATGCGTG CCGATGACTT GCTCAATAGC ACCATTCGAC GCTTAAGGTT ATTTCTCGGT 
GACGATGCGG CGCATCTATT GGTCAATGTA GCTAATCAAG GTTTTATCCT TTACGCCACT 
CCTAGAAAAC AATCCCGTAC CGAGCTTAAT TCGCCGCTTT TTAAACTAGG TATGCCACAG 
TTTATGTTGC TGATGCTCTT GACCTTGGCA ACCCTGTTTT GGGTTGGCTC TCGGATCTCC 
CACCCTACAA GCATCACGCC CAATTATGCG ACGCAATTAC CTATGCATAA TGGTGATTTG 
TCAGAGATCC AATTTTATAC GGGACAGCCG ATGGACCATT CGATGAAGCC ATTAGTCGAC 
CACTTTCTGG CGCAGGTTTC GGCTTGTGCC ATTTTCCCTT GGCAATCCAT CGCCGCCACA 
ATCTCAACGG ACCAAAAGTT TGTGAGTCTA GTGCTAAAAA ATGAAGATGC CGATGGGCTG 
AGATTCGAGA CCATCAAGAT GATGTCCGAG GATTTTAATG CCGATGTGAT TGATGAGTTA 
TGGCTAAAAA TGGTGGGGAT CTGTGCTTAA
 
Protein sequence
MQIGACWFNA QEQVLVDSAS GRSWLLSADE FQILSLLSAQ RGKVVSRMEL QQAIRPQLKL 
PMRADDLLNS TIRRLRLFLG DDAAHLLVNV ANQGFILYAT PRKQSRTELN SPLFKLGMPQ 
FMLLMLLTLA TLFWVGSRIS HPTSITPNYA TQLPMHNGDL SEIQFYTGQP MDHSMKPLVD 
HFLAQVSACA IFPWQSIAAT ISTDQKFVSL VLKNEDADGL RFETIKMMSE DFNADVIDEL 
WLKMVGICA