| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Shewana3_3343 |
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| Symbol | |
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| ID | 4477644 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Shewanella sp. ANA-3 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_008577 |
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| Strand | - |
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| Start bp | 4012248 |
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| End bp | 4012991 |
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| Gene Length | 744 bp |
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| Protein Length | 247 aa |
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| Translation table | 11 |
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| GC content | 52% |
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| IMG OID | 639727953 |
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| Product | lysine decarboxylase transcriptional regulator, CadC |
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| Protein accession | YP_870973 |
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| Protein GI | 117921781 |
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| COG category | [K] Transcription |
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| COG ID | [COG3710] DNA-binding winged-HTH domains |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 25 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 31 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGCAGGTGG GGGGCTGTTG GTTTGACCGT GAGCGTGGCT TACTCGTCGA ACAGGCTCGT
GATGAATCTT GGCACCTTCC CCGTGCCGAG TTGCAAGTGT TGAGCCTGTT GGTTGAACAT
CAAGGCAAAC TGGTCTCCAA GCATGAGCTG AAGACTGGCG ATGGGGCGCA TCCTCCTCTG
ACTGACACTT CGTTAGCGCG GGCGGTCTTT ATGATCCGCT CCTTCCTCGG ACCCCAATAT
GAGGGGCTGA TTGAAACCGT CAAGGGGCAA GGCTATCTGC TGCACTGTAC CCAAGGGCAA
AAGCTAAAAA GCTTGCGTTA TCCTAGGCTG CAATCCTTAC CTTGGTGGAG TGTGTTGCTG
GTTTTTGGAT TTATGCTCGC GATTTCAGGA TTTTACCTTA GCCGCATCGA CCACAGCGTA
CCGACTCAGC CTTTGCTCTC CACCGATTTG CCCTTAGCCT CGGGTCAACA TATTCGACTG
CATTTGTATG CCAACTCGAA AACCAACAAT ACCCTATTGT TTGAGTTAGG CGACCGCTTA
GGCCAAGGGT TGAGTCGCTG CGGCCATAGT GATTGGTCCG AAGTGTATTC CTCACTCTCC
CACGATAAAC AGGTGCTCAA CATTACTATG CGGGGTTATA AACTCGGGCA ATCGGTGATC
CGCAACTTGA AGATCAGTGA CTTCAGGCGG CCGAAGGAAT TTATCGATGT GAACTGGCTA
CAGGAGGTCG GGATCTGTGG CTAA
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| Protein sequence | MQVGGCWFDR ERGLLVEQAR DESWHLPRAE LQVLSLLVEH QGKLVSKHEL KTGDGAHPPL
TDTSLARAVF MIRSFLGPQY EGLIETVKGQ GYLLHCTQGQ KLKSLRYPRL QSLPWWSVLL
VFGFMLAISG FYLSRIDHSV PTQPLLSTDL PLASGQHIRL HLYANSKTNN TLLFELGDRL
GQGLSRCGHS DWSEVYSSLS HDKQVLNITM RGYKLGQSVI RNLKISDFRR PKEFIDVNWL
QEVGICG
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