Gene Shewana3_3320 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagShewana3_3320 
Symbol 
ID4477621 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameShewanella sp. ANA-3 
KingdomBacteria 
Replicon accessionNC_008577 
Strand
Start bp3981669 
End bp3982406 
Gene Length738 bp 
Protein Length245 aa 
Translation table11 
GC content51% 
IMG OID639727930 
Productdienelactone hydrolase 
Protein accessionYP_870950 
Protein GI117921758 
COG category[Q] Secondary metabolites biosynthesis, transport and catabolism 
COG ID[COG0412] Dienelactone hydrolase and related enzymes 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones21 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones36 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGTTAGTGA CTCAGCAAAC TCAGAATATC AACACGCCCA CAGGGCCGAT GCGCACTTAT 
GTCTATCGCC CAGATGCCCC AGGGCAATTC CCCTGCATCC TGTTCTATTC TGAGATTTTT
CAGCAAACCG CGCCCATCGC CCGCACCGCA ACTATCCTCG CTGGCCATGG TTTTGTGGTG
TTAGTGCCAG AGGTCTTCCA CGAGCTAAAT CCGATAGGCA CAGTGCTTGC CTACGACGAT
GTGGGCAAAG ATAAAGGCAA TGCCGATAAA TTTGCCAAAC CCTTAGAGCA ACACGATAGC
GACACCCAAG CCCTTATCGA CTTTGCTCGT CAGCAGAGTT ATTGCACCGG TAAGGTTGGC
AGTATGGGCG TGTGTATTGG CGGCCACTTA GCCTACCGCG CCGCACTTAA TCCCGAGATT
TTGGGGGCGT TTTGCCTCTA TCCGACCGAC ATTCACTCCA ATACCCTGCC CTGTGCCTAT
GGCAATGACT CGCTGAGTCG CAGCGGCGAT ATTCAAGGGG AATTAGTGTT AGTGTTTGGC
AAGCAAGATC CCCATGTATC ACCCGAAGGT CGGGTATTGA TCCACCAACA ATTGATGGCT
AAAAACCGCA ATTTCAGTTG GTTAGAGGTT AATGCTCAGC ATGCCTTTAT GCGTGATGAG
GGTGAGCGCT ACGATCCCGC GCTGGCGCTG CAAATGTATC AACAATCCGT GGCGTTTTTT
CACCGTGTAT TGAGATGA
 
Protein sequence
MLVTQQTQNI NTPTGPMRTY VYRPDAPGQF PCILFYSEIF QQTAPIARTA TILAGHGFVV 
LVPEVFHELN PIGTVLAYDD VGKDKGNADK FAKPLEQHDS DTQALIDFAR QQSYCTGKVG
SMGVCIGGHL AYRAALNPEI LGAFCLYPTD IHSNTLPCAY GNDSLSRSGD IQGELVLVFG
KQDPHVSPEG RVLIHQQLMA KNRNFSWLEV NAQHAFMRDE GERYDPALAL QMYQQSVAFF
HRVLR