Gene Shewana3_3244 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagShewana3_3244 
Symbol 
ID4477353 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameShewanella sp. ANA-3 
KingdomBacteria 
Replicon accessionNC_008577 
Strand
Start bp3887552 
End bp3889027 
Gene Length1476 bp 
Protein Length491 aa 
Translation table11 
GC content51% 
IMG OID639727854 
ProductFAD dependent oxidoreductase 
Protein accessionYP_870874 
Protein GI117921682 
COG category[E] Amino acid transport and metabolism 
COG ID[COG0665] Glycine/D-amino acid oxidases (deaminating) 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones27 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones35 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
GTGAAAGAGC GCGGATTTTG GTTCGACACT GAGCCTCAGT TAAATCAACG AGCCGTTTTA 
CCACCCTTAG AGCAGGATAT CACCGCCGAT GTTGCCATTA TCGGTGCGGG GTATTCCGGG
CTTTGGACGG CTTATTATCT AAAGCAATAC CAGCCAAATC TGTCTGTGGT TATCCTTGAG
GCCGAATACA TAGGCCAAGG TGCATCCGGC CGCAATGGCG GTTGGTTGAT GGGCAGTTTC
AGTGGCGATG TGGCCTATCT TAATCGGCTC GAGGGCGAGC AGCGCCTTAT CGCTAAAGCC
ATTATTCAAG AAACTATTTC TGAAGTGGCC ACAGTTTGCG CTAAGCACCA TATCGACTGT
GATTTACACC ATGGCGGTAA CTTGCGGGTC GCGGCGCGTT ATCCAGAGCA ACTCGCTAAT
ATTAAAGCCG AATTAGCGCA GTGGCGCGCA GATGGCTTTG GTGAAGAAGA TATACGTTGG
CTGGATAAGA CCGAGCTCGA TAAGCAAGTG TCTATGGCCG AGGGCCAAGC GGCACTTTTT
ACCCCCCATT GCGCGCGAAT ACATCCGGCG AAACTCGTCT GTGGCTTGGC TGATCTGGTG
CAAAGCTTAG GGGTGAAGAT CTACGAGCGC ACGTCTGTAA ATCACATGGC GCATCTTGGT
GATGCACTTA CTCAATTACA GACGCCGCAA GGAAATGTTC GTGCGGCGAT TGTGGTGCCC
GCAGTGGAAG GTTATCTACG TCAGCTCAGT GGGCTGGGGC GATTTACTTT ACCCGTGCAG
AGTTTACTTA TCGCCACCGA GCCGTTAACG AACGTTACAT GGGATGCAAT TGGCTTGGCT
AATCGCGCGA CCTTTAGTGA TGCCAGCCGT ATAGTGACTT ACGGTCAGCG TAGCCCTGAT
AATCGGTTGA TATTTGGTGC CCGTGGCGGC TATGGCTTTG GCGCGAAAAT ACGCACCGAA
TTTGGTTTTG ACCCTAAACT TTTTAATGGG AAATTTCCTG TAAATCAAAG CCCACCTCAG
TGTGCTTTCG AGGGCGAATT TGGCTTTCGT TATCAATTAT TGTTGGCGTT ATTTCCTCAA
CTTAAGGGCG TACAAATTAC CCATGGTTGG GGCGGAACGT TAGCCTTGGC GAGGCGTTTT
GCTCCCCATG CCATCTTTGA TCAAAGTCTG GGTTTAGGCC TGATTGGCGG CTATGGAGGG
GAAGGTGTCG GGGCGGCAAA CCTATTTGCC CGCACGCTGG TGGACCTGAT ATTAGGGCGT
GATACACAGC TTGCATCTAT GCCTTGGGCG TTTAATGCTT CAGTTCAACA GGTATTAGCA
CCCTGGGAGC GCGAGCCTTT GCCTTGGCTC GCTTACCATG GCATGAACAA GATTTTTGCG
TGGGAAGATA GGCTCTACAG TCAGCCAAAG AGTGCGGCTT GGCAAAAGGG CTTAGCTAAG
CGGCTCGCGA ATCGATTAGA AGGCTTAATG AGTTAA
 
Protein sequence
MKERGFWFDT EPQLNQRAVL PPLEQDITAD VAIIGAGYSG LWTAYYLKQY QPNLSVVILE 
AEYIGQGASG RNGGWLMGSF SGDVAYLNRL EGEQRLIAKA IIQETISEVA TVCAKHHIDC
DLHHGGNLRV AARYPEQLAN IKAELAQWRA DGFGEEDIRW LDKTELDKQV SMAEGQAALF
TPHCARIHPA KLVCGLADLV QSLGVKIYER TSVNHMAHLG DALTQLQTPQ GNVRAAIVVP
AVEGYLRQLS GLGRFTLPVQ SLLIATEPLT NVTWDAIGLA NRATFSDASR IVTYGQRSPD
NRLIFGARGG YGFGAKIRTE FGFDPKLFNG KFPVNQSPPQ CAFEGEFGFR YQLLLALFPQ
LKGVQITHGW GGTLALARRF APHAIFDQSL GLGLIGGYGG EGVGAANLFA RTLVDLILGR
DTQLASMPWA FNASVQQVLA PWEREPLPWL AYHGMNKIFA WEDRLYSQPK SAAWQKGLAK
RLANRLEGLM S