Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Shewana3_3244 |
Symbol | |
ID | 4477353 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Shewanella sp. ANA-3 |
Kingdom | Bacteria |
Replicon accession | NC_008577 |
Strand | - |
Start bp | 3887552 |
End bp | 3889027 |
Gene Length | 1476 bp |
Protein Length | 491 aa |
Translation table | 11 |
GC content | 51% |
IMG OID | 639727854 |
Product | FAD dependent oxidoreductase |
Protein accession | YP_870874 |
Protein GI | 117921682 |
COG category | [E] Amino acid transport and metabolism |
COG ID | [COG0665] Glycine/D-amino acid oxidases (deaminating) |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 27 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 35 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | GTGAAAGAGC GCGGATTTTG GTTCGACACT GAGCCTCAGT TAAATCAACG AGCCGTTTTA CCACCCTTAG AGCAGGATAT CACCGCCGAT GTTGCCATTA TCGGTGCGGG GTATTCCGGG CTTTGGACGG CTTATTATCT AAAGCAATAC CAGCCAAATC TGTCTGTGGT TATCCTTGAG GCCGAATACA TAGGCCAAGG TGCATCCGGC CGCAATGGCG GTTGGTTGAT GGGCAGTTTC AGTGGCGATG TGGCCTATCT TAATCGGCTC GAGGGCGAGC AGCGCCTTAT CGCTAAAGCC ATTATTCAAG AAACTATTTC TGAAGTGGCC ACAGTTTGCG CTAAGCACCA TATCGACTGT GATTTACACC ATGGCGGTAA CTTGCGGGTC GCGGCGCGTT ATCCAGAGCA ACTCGCTAAT ATTAAAGCCG AATTAGCGCA GTGGCGCGCA GATGGCTTTG GTGAAGAAGA TATACGTTGG CTGGATAAGA CCGAGCTCGA TAAGCAAGTG TCTATGGCCG AGGGCCAAGC GGCACTTTTT ACCCCCCATT GCGCGCGAAT ACATCCGGCG AAACTCGTCT GTGGCTTGGC TGATCTGGTG CAAAGCTTAG GGGTGAAGAT CTACGAGCGC ACGTCTGTAA ATCACATGGC GCATCTTGGT GATGCACTTA CTCAATTACA GACGCCGCAA GGAAATGTTC GTGCGGCGAT TGTGGTGCCC GCAGTGGAAG GTTATCTACG TCAGCTCAGT GGGCTGGGGC GATTTACTTT ACCCGTGCAG AGTTTACTTA TCGCCACCGA GCCGTTAACG AACGTTACAT GGGATGCAAT TGGCTTGGCT AATCGCGCGA CCTTTAGTGA TGCCAGCCGT ATAGTGACTT ACGGTCAGCG TAGCCCTGAT AATCGGTTGA TATTTGGTGC CCGTGGCGGC TATGGCTTTG GCGCGAAAAT ACGCACCGAA TTTGGTTTTG ACCCTAAACT TTTTAATGGG AAATTTCCTG TAAATCAAAG CCCACCTCAG TGTGCTTTCG AGGGCGAATT TGGCTTTCGT TATCAATTAT TGTTGGCGTT ATTTCCTCAA CTTAAGGGCG TACAAATTAC CCATGGTTGG GGCGGAACGT TAGCCTTGGC GAGGCGTTTT GCTCCCCATG CCATCTTTGA TCAAAGTCTG GGTTTAGGCC TGATTGGCGG CTATGGAGGG GAAGGTGTCG GGGCGGCAAA CCTATTTGCC CGCACGCTGG TGGACCTGAT ATTAGGGCGT GATACACAGC TTGCATCTAT GCCTTGGGCG TTTAATGCTT CAGTTCAACA GGTATTAGCA CCCTGGGAGC GCGAGCCTTT GCCTTGGCTC GCTTACCATG GCATGAACAA GATTTTTGCG TGGGAAGATA GGCTCTACAG TCAGCCAAAG AGTGCGGCTT GGCAAAAGGG CTTAGCTAAG CGGCTCGCGA ATCGATTAGA AGGCTTAATG AGTTAA
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Protein sequence | MKERGFWFDT EPQLNQRAVL PPLEQDITAD VAIIGAGYSG LWTAYYLKQY QPNLSVVILE AEYIGQGASG RNGGWLMGSF SGDVAYLNRL EGEQRLIAKA IIQETISEVA TVCAKHHIDC DLHHGGNLRV AARYPEQLAN IKAELAQWRA DGFGEEDIRW LDKTELDKQV SMAEGQAALF TPHCARIHPA KLVCGLADLV QSLGVKIYER TSVNHMAHLG DALTQLQTPQ GNVRAAIVVP AVEGYLRQLS GLGRFTLPVQ SLLIATEPLT NVTWDAIGLA NRATFSDASR IVTYGQRSPD NRLIFGARGG YGFGAKIRTE FGFDPKLFNG KFPVNQSPPQ CAFEGEFGFR YQLLLALFPQ LKGVQITHGW GGTLALARRF APHAIFDQSL GLGLIGGYGG EGVGAANLFA RTLVDLILGR DTQLASMPWA FNASVQQVLA PWEREPLPWL AYHGMNKIFA WEDRLYSQPK SAAWQKGLAK RLANRLEGLM S
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