Gene Shewana3_3130 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagShewana3_3130 
Symbol 
ID4477724 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameShewanella sp. ANA-3 
KingdomBacteria 
Replicon accessionNC_008577 
Strand
Start bp3756543 
End bp3757004 
Gene Length462 bp 
Protein Length153 aa 
Translation table11 
GC content41% 
IMG OID639727734 
Producttype IV pilus assembly protein PilX 
Protein accessionYP_870760 
Protein GI117921568 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones24 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones22 
Fosmid unclonability p-value0.706597 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGAGAAAGC AGAAAGGGAT AGTGTTGTTT TTTGCATTAA TTGTCTTGGT CCTCATGACA 
GTTATTGGTG TTGCATTGGC GGTTAACTCC ACACAATCGC TACGAATGTC AGGTGCTGGC
GCAGAAAGAA TAGAAGCTAA AGCCATTGCT GATGGTGGTT TAGAAGCTGC GATCGAGGCT
AATAAAGGAA CAAGTTTGGC AACGTTATCA AATATAGCAA CTACAGCTGA ATTTGGTGCT
CAACAGATAT TAACCCCCAT TCCATTCGAA GTTGATGCAA GTGGTAATAT CGTTATTGGT
GCTAAAGATG TGGGATGTCA ACGGAGTTCG AGAGCTAATG GTGGAAATCT CATTAATTGC
CGACGAGTGG AAATTAACAG TACAGTTAAT TTTGGTCGTG ATAATTTAGG ACGGCTAACT
GTTGTTACGT TGGTGGAACA AGAAGTAATA GCTGGGAGTT AA
 
Protein sequence
MRKQKGIVLF FALIVLVLMT VIGVALAVNS TQSLRMSGAG AERIEAKAIA DGGLEAAIEA 
NKGTSLATLS NIATTAEFGA QQILTPIPFE VDASGNIVIG AKDVGCQRSS RANGGNLINC
RRVEINSTVN FGRDNLGRLT VVTLVEQEVI AGS