Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Shewana3_3130 |
Symbol | |
ID | 4477724 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Shewanella sp. ANA-3 |
Kingdom | Bacteria |
Replicon accession | NC_008577 |
Strand | - |
Start bp | 3756543 |
End bp | 3757004 |
Gene Length | 462 bp |
Protein Length | 153 aa |
Translation table | 11 |
GC content | 41% |
IMG OID | 639727734 |
Product | type IV pilus assembly protein PilX |
Protein accession | YP_870760 |
Protein GI | 117921568 |
COG category | |
COG ID | |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 24 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 22 |
Fosmid unclonability p-value | 0.706597 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGAGAAAGC AGAAAGGGAT AGTGTTGTTT TTTGCATTAA TTGTCTTGGT CCTCATGACA GTTATTGGTG TTGCATTGGC GGTTAACTCC ACACAATCGC TACGAATGTC AGGTGCTGGC GCAGAAAGAA TAGAAGCTAA AGCCATTGCT GATGGTGGTT TAGAAGCTGC GATCGAGGCT AATAAAGGAA CAAGTTTGGC AACGTTATCA AATATAGCAA CTACAGCTGA ATTTGGTGCT CAACAGATAT TAACCCCCAT TCCATTCGAA GTTGATGCAA GTGGTAATAT CGTTATTGGT GCTAAAGATG TGGGATGTCA ACGGAGTTCG AGAGCTAATG GTGGAAATCT CATTAATTGC CGACGAGTGG AAATTAACAG TACAGTTAAT TTTGGTCGTG ATAATTTAGG ACGGCTAACT GTTGTTACGT TGGTGGAACA AGAAGTAATA GCTGGGAGTT AA
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Protein sequence | MRKQKGIVLF FALIVLVLMT VIGVALAVNS TQSLRMSGAG AERIEAKAIA DGGLEAAIEA NKGTSLATLS NIATTAEFGA QQILTPIPFE VDASGNIVIG AKDVGCQRSS RANGGNLINC RRVEINSTVN FGRDNLGRLT VVTLVEQEVI AGS
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