Gene Shewana3_3056 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagShewana3_3056 
Symbol 
ID4478319 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameShewanella sp. ANA-3 
KingdomBacteria 
Replicon accessionNC_008577 
Strand
Start bp3663115 
End bp3663606 
Gene Length492 bp 
Protein Length163 aa 
Translation table11 
GC content47% 
IMG OID639727659 
Producthypothetical protein 
Protein accessionYP_870686 
Protein GI117921494 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones16 
Plasmid unclonability p-value0.469706 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones15 
Fosmid unclonability p-value0.0518674 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
TTGCGAATAT TGTGTCTTTT AGTCTGTCTT ATTTGGGTTC CGGCTTTGTT TCCTGCGTCT 
GTACACGCTA ACTCAGGGGA AATGCCAGCA GAACAGCAGT TAGCCGTAAA ATACATGAAC
GCGCTAACCG AGCACGACTA TCAAACACTC GGCAAATTCT ATAACCGTGA TACCGTCTTC
TTCGATAAAA CCGCCAATCG TAAATACACG GGTGGGCGGT TTATTATCGA TTTCCTCGAG
CGCGCCCACG AGGGTGTGCT CGAATATGAT TTCAATATCG AGCATATGTA TAACGCAGGC
TCCCTCGTGG TGATGATTGG TAACTATCAC TTTAAGGGAC CCGGCGAGCA GTTTGGTAAA
CCCGGAAAAA TTATTGATGT CGCCATTCCT GGGGTCACCA GTCTTAAGCT CGATATGCGT
AATCACAGGG TCACAGAGCA TGTGGATCTG ATTGATTACC AGACCATGTC AGACCAATTA
GCGATGCAGT AG
 
Protein sequence
MRILCLLVCL IWVPALFPAS VHANSGEMPA EQQLAVKYMN ALTEHDYQTL GKFYNRDTVF 
FDKTANRKYT GGRFIIDFLE RAHEGVLEYD FNIEHMYNAG SLVVMIGNYH FKGPGEQFGK
PGKIIDVAIP GVTSLKLDMR NHRVTEHVDL IDYQTMSDQL AMQ