Gene Shewana3_3043 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagShewana3_3043 
Symbol 
ID4478306 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameShewanella sp. ANA-3 
KingdomBacteria 
Replicon accessionNC_008577 
Strand
Start bp3647913 
End bp3648437 
Gene Length525 bp 
Protein Length174 aa 
Translation table11 
GC content47% 
IMG OID639727647 
Productdinucleoside polyphosphate hydrolase 
Protein accessionYP_870674 
Protein GI117921482 
COG category[L] Replication, recombination and repair
[R] General function prediction only 
COG ID[COG0494] NTP pyrophosphohydrolases including oxidative damage repair enzymes 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones
Plasmid unclonability p-value0.00000000556575 
Plasmid hitchhikingNo 
Plasmid clonabilityunclonable 
 

Fosmid Coverage information

Num covering fosmid clones21 
Fosmid unclonability p-value0.544281 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
GTGATTGATA GCGACGGCTT TCGCGCAAAT GTGGGCATAA TAATTTGTAA TAGATACGGC 
CAAGTCATGT GGGCCAGACG ATTCGGACAA CATTCATGGC AATTTCCTCA GGGCGGTGTC
GATGATGGTG AATCGGCCGA AGAGGCGATG TACCGTGAAT TGTATGAGGA AGTAGGCTTA
AGACCCGAGC ATGTCACTAT ATTAACCTCG ACCCGTTCTT GGTTAAGATA CCGCTTGCCC
AAGCGTTTAG TGAGACAGGA CAGCAAGCCT GTGTGCATTG GCCAAAAACA AAAATGGTTT
CTGTTACAAC TCAAAAGCCA AGATAGTGCG ATTAATTTAA GTTCCTCAGG CCACCCTGAG
TTTGACGATT GGCGTTGGGT AAGTTATTGG TATCCCGTGC GGCAGGTTGT CTCATTTAAG
CGTGATGTTT ATCGTAAGGT AATGAAAGAG TTTGCGGTAA CGGCATTGTC ATTCCAAACC
CAGGAAATTC CGAGGAAGCG GGTAAGACAA AGAACAACGG GCTGA
 
Protein sequence
MIDSDGFRAN VGIIICNRYG QVMWARRFGQ HSWQFPQGGV DDGESAEEAM YRELYEEVGL 
RPEHVTILTS TRSWLRYRLP KRLVRQDSKP VCIGQKQKWF LLQLKSQDSA INLSSSGHPE
FDDWRWVSYW YPVRQVVSFK RDVYRKVMKE FAVTALSFQT QEIPRKRVRQ RTTG