Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Shewana3_2952 |
Symbol | smpB |
ID | 4478159 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Shewanella sp. ANA-3 |
Kingdom | Bacteria |
Replicon accession | NC_008577 |
Strand | + |
Start bp | 3545220 |
End bp | 3545711 |
Gene Length | 492 bp |
Protein Length | 163 aa |
Translation table | 11 |
GC content | 47% |
IMG OID | 639727557 |
Product | SsrA-binding protein |
Protein accession | YP_870584 |
Protein GI | 117921392 |
COG category | [O] Posttranslational modification, protein turnover, chaperones |
COG ID | [COG0691] tmRNA-binding protein |
TIGRFAM ID | [TIGR00086] SsrA-binding protein |
| ![](https://exploration.weizmann.ac.il/pandatox/images_new/ic_cp.jpg)
![](https://exploration.weizmann.ac.il/pandatox/images_new/ic_hh.jpg)
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Plasmid Coverage information |
Num covering plasmid clones | 18 |
Plasmid unclonability p-value | 0.754434 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 30 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGGTAAAGA AAAACTCAAA AAAAGCCGCG CCTGCGACAA TCGCACGCAA TAAGCGCGCA ACCTTCGAAT ACCGTTTCGA AGAAAAAATG GAAGCCGGCA TTTCCCTCAT GGGATGGGAG GTGAAGTCTA TCCGCATGGG TAAAGTGAAC CTATCGGACT GCTACGTCTT CTTAAAAAAT GGTGAAGCCT TTATGCACGG CTGTACCATT ATTCCGCTTA ATACCGCATC GACCCATGTG GTGTGCGACC CGATTCGACT GAAGAAATTG CTCTTAAGTC GTAAAGAGTT AGATAAATTA GCTGGTCTTG TTGAGCGCCA AGGCTACTCG ATTATCCCTA TCTCCATGTA CTGGCGTAAA GGGGCTTGGG TCAAAGTAGA AATCGGCCTA GGTAAAGGTA AAAAAGACCA CGACAAGCGT GAAGATACCA AAGCACGCGA GTGGGAAGTG GAAAAAGCCC GCGTAATGAA AAAGGAAAAA ACGCGCGGAT AA
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Protein sequence | MVKKNSKKAA PATIARNKRA TFEYRFEEKM EAGISLMGWE VKSIRMGKVN LSDCYVFLKN GEAFMHGCTI IPLNTASTHV VCDPIRLKKL LLSRKELDKL AGLVERQGYS IIPISMYWRK GAWVKVEIGL GKGKKDHDKR EDTKAREWEV EKARVMKKEK TRG
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