Gene Shewana3_2949 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagShewana3_2949 
Symbol 
ID4478156 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameShewanella sp. ANA-3 
KingdomBacteria 
Replicon accessionNC_008577 
Strand
Start bp3543604 
End bp3544128 
Gene Length525 bp 
Protein Length174 aa 
Translation table11 
GC content47% 
IMG OID639727554 
ProductSmpA/OmlA domain-containing protein 
Protein accessionYP_870581 
Protein GI117921389 
COG category[J] Translation, ribosomal structure and biogenesis 
COG ID[COG2913] Small protein A (tmRNA-binding) 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones33 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones30 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGGCCGCCA GATTTTCAGA AGTAGCGCAT ACAATGATCA ATAAAAAGCA AAGTCTTACC 
CTGCTGAGCG CCATTGCGCT CTCAGTTTCG CTCAGTGCCT GTAGCGTGTT TGATTGGCTG
ATCTATAAGC CCGATATTCC GCAAGGCAAC TACATGGAGC CGCAACAGGT TGAAAAGTTG
CGTATCGACA TGACCAAAGA GCAGGCCGAA TACATTCTTG GTCGCCCAGT ATTGCGTGAC
AGCTTTGCCG ATGACACTTG GTATTATGTG TATCACTATA AGAGTGGCCG TGATGCGAGC
ATTACCCACA AAGAACTGAT CCTGCACTTT ACCGGTAACA AATTAAGCTT AGTGAAGGGC
GACTATGACT TAAGCCCAGA GTTTAATACG CCGCTTGAGC AGAGTAAGTT ACCTATGGCC
AACACCGCTG AGTCTGCGCC ACTCGTGCCA GCACAGCGCC CAGATGAAAA GCCATTAGTG
AAAGAAAATC AAACCGAAGC GCAAGTTCAA AAGCCAATCA AGTAA
 
Protein sequence
MAARFSEVAH TMINKKQSLT LLSAIALSVS LSACSVFDWL IYKPDIPQGN YMEPQQVEKL 
RIDMTKEQAE YILGRPVLRD SFADDTWYYV YHYKSGRDAS ITHKELILHF TGNKLSLVKG
DYDLSPEFNT PLEQSKLPMA NTAESAPLVP AQRPDEKPLV KENQTEAQVQ KPIK