Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Shewana3_2928 |
Symbol | |
ID | 4478932 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Shewanella sp. ANA-3 |
Kingdom | Bacteria |
Replicon accession | NC_008577 |
Strand | - |
Start bp | 3509101 |
End bp | 3510564 |
Gene Length | 1464 bp |
Protein Length | 487 aa |
Translation table | 11 |
GC content | 53% |
IMG OID | 639727533 |
Product | DEAD/DEAH box helicase domain-containing protein |
Protein accession | YP_870560 |
Protein GI | 117921368 |
COG category | [J] Translation, ribosomal structure and biogenesis [K] Transcription [L] Replication, recombination and repair |
COG ID | [COG0513] Superfamily II DNA and RNA helicases |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 20 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 36 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGGAACCAA GCTGCACGCA GCGGTTTTGC ATTCACACTT CGCACTCACA AAAAAGAGCT TTTATGAAAT TTGACACACT CGGCTTATCT TCCCCTATTT TGAATGCGAT AGCTGAGTGT GGCTATCTGC AGCTCACGCA AGTGCAGCAG CAGGTGATCC CCCTCGCGCT CGAAGGAAAA GACATTATGG CCTGCGCCCA AACGGGCACG GGCAAAACCG CATCCTTTGC CTTACCCGTG CTTGAGCAAC TGTCAAAACA GCCAAATGAT AAGCCTCTGC TGCGTGCGCT AGTGATGACA CCGACACGGG AACTGGCGAT TCAAGTTTGC GCTAACATTC AGAAATACAG TCAGTTTTTA CCCCTGAAAA CCTTAGCCGT TTATGGCGGC GCGAACATGA ATCCGCAGCG AAAAGGGGTG GAGCAGGGCG TGGATATTCT GGTGGCAACA CCAGGGCGAC TATTCGACAT TATTGGCCAG TTCCATTTAG ACCTCTCTAG TGTGACCACT TTAGTGATCG ACGAAGCGGA CCGCATGCTC GATTTAGGCT TTGTGCGCGA CATTGAAAAG GTAAAACGCC TTATCGCCAC TGAGCATCAA ACCATGTTGT TTTCAGCCAC CTATAGCGAT GCGGTAAAGC AGCTTTCCCA TAAGATGCTC AATCAACCCG AGTGGGTGAA TGTGGCCGAA AATACCACGG CATCCACGGT TGAGCAGTTG GTCTATCGAG TCGATAAACG CCGCAAGGCC GAGTTATTGT CTGAGCTTGT CGGGCGCAAC AATTGGCGTC AGGTGCTGGT GTTTGCCAGC ACCAAGGAAT GCGCCGAGCA TCTATTGCAG GAGCTCACCC TCGATGGGAT CAGCGCGGGC GTGTTCCACG GCGATAAAAC CCAAGGCGCG CGTAATCGTG TGCTCGATGA TTTTAAAGCG GGCAAATTGC GAGTGCTGGT GGCGACCGAT GTGGCGGCGC GCGGCTTAGA TATTCAAGCG TTGCCCTTAG TGATTAACCT CGAATTGCCA TTCCTTGCGG AAGACTATGT GCACCGTATT GGTCGTACTG GCCGTGCGGG ACTTTCGGGG CGCGCGATAT CATTTGTGTC TCCAGCCGAT GATGAGATGT TGGCCGAGAT AGAGGCCTTG ATTGGCCAAA CCTTGCCAGT GACGGTACAG CCCGGTTACG AGGAAGGCAC ACCGCTGCCA GCGCGTTACC GTGAGGCGCC TACGGACACC ACTAAGACCG CTAAGTGGAA TTACAAGAGC AGTCGCAATA CGGGGGCTAA AGGGGCGGGC GGCAATGGCA CGAAAGCTAA TGGCTCGAAA GGCAACGGCG CGCGAGGTAA GGGTGGCTTT GGCGGCAACG CCGGATTTGG TCAATCGAGC GAAAGCCAGG CGCGGGCGCG TAAATCGCCA GCCCGTGAAG GTAAATACGC TAAAAATAAG CCGAATACTC AAAAGGGTAA ATAA
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Protein sequence | MEPSCTQRFC IHTSHSQKRA FMKFDTLGLS SPILNAIAEC GYLQLTQVQQ QVIPLALEGK DIMACAQTGT GKTASFALPV LEQLSKQPND KPLLRALVMT PTRELAIQVC ANIQKYSQFL PLKTLAVYGG ANMNPQRKGV EQGVDILVAT PGRLFDIIGQ FHLDLSSVTT LVIDEADRML DLGFVRDIEK VKRLIATEHQ TMLFSATYSD AVKQLSHKML NQPEWVNVAE NTTASTVEQL VYRVDKRRKA ELLSELVGRN NWRQVLVFAS TKECAEHLLQ ELTLDGISAG VFHGDKTQGA RNRVLDDFKA GKLRVLVATD VAARGLDIQA LPLVINLELP FLAEDYVHRI GRTGRAGLSG RAISFVSPAD DEMLAEIEAL IGQTLPVTVQ PGYEEGTPLP ARYREAPTDT TKTAKWNYKS SRNTGAKGAG GNGTKANGSK GNGARGKGGF GGNAGFGQSS ESQARARKSP AREGKYAKNK PNTQKGK
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