Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Shewana3_2887 |
Symbol | |
ID | 4478762 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Shewanella sp. ANA-3 |
Kingdom | Bacteria |
Replicon accession | NC_008577 |
Strand | + |
Start bp | 3455008 |
End bp | 3455436 |
Gene Length | 429 bp |
Protein Length | 142 aa |
Translation table | 11 |
GC content | 45% |
IMG OID | 639727493 |
Product | hypothetical protein |
Protein accession | YP_870520 |
Protein GI | 117921328 |
COG category | |
COG ID | |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 17 |
Plasmid unclonability p-value | 0.527311 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 4 |
Fosmid unclonability p-value | 0.000000752097 |
Fosmid Hitchhiker | No |
Fosmid clonability | decreased coverage |
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Sequence |
Gene sequence | ATGAAATCAA AAACTTCGGT CATTATTGGC AGTATATTTG CCGCATATGT CGCCTTCGTC GCTGTTGTGG TGCTGGTATA TGAGCCCACC CCAGATGAAA TGGATTGGGA AGATAGACAA GTCTATAACA GCCAGAAATT AAATGAGTTA ACCCTAGGAC AGGACATTGC CACCGTAAAA ACCCTCTTTG GCAAGGCCGA TTTTACAGAA GCCAAATCCC TTAAAGATGG CCAACTACAA GTGCTCTTTT ATCGTACTCA CCATGAAAAA TCCGATGGCG TGACCACCAA AGAAGAATGC ACACCACTGA TTTTTAAAGA CGATAAACTC GTGGCCTGGG GCGATGATAC CTATAAACAG TACCTCGAAG CCGGCACCGA TATCGTCAGC CGCACCGCCA AAGAAGCCGA AAGCTCAAGT AAAAATTGA
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Protein sequence | MKSKTSVIIG SIFAAYVAFV AVVVLVYEPT PDEMDWEDRQ VYNSQKLNEL TLGQDIATVK TLFGKADFTE AKSLKDGQLQ VLFYRTHHEK SDGVTTKEEC TPLIFKDDKL VAWGDDTYKQ YLEAGTDIVS RTAKEAESSS KN
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