Gene Shewana3_2887 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagShewana3_2887 
Symbol 
ID4478762 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameShewanella sp. ANA-3 
KingdomBacteria 
Replicon accessionNC_008577 
Strand
Start bp3455008 
End bp3455436 
Gene Length429 bp 
Protein Length142 aa 
Translation table11 
GC content45% 
IMG OID639727493 
Producthypothetical protein 
Protein accessionYP_870520 
Protein GI117921328 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones17 
Plasmid unclonability p-value0.527311 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones
Fosmid unclonability p-value0.000000752097 
Fosmid HitchhikerNo 
Fosmid clonabilitydecreased coverage 
 

Sequence

Gene sequence
ATGAAATCAA AAACTTCGGT CATTATTGGC AGTATATTTG CCGCATATGT CGCCTTCGTC 
GCTGTTGTGG TGCTGGTATA TGAGCCCACC CCAGATGAAA TGGATTGGGA AGATAGACAA
GTCTATAACA GCCAGAAATT AAATGAGTTA ACCCTAGGAC AGGACATTGC CACCGTAAAA
ACCCTCTTTG GCAAGGCCGA TTTTACAGAA GCCAAATCCC TTAAAGATGG CCAACTACAA
GTGCTCTTTT ATCGTACTCA CCATGAAAAA TCCGATGGCG TGACCACCAA AGAAGAATGC
ACACCACTGA TTTTTAAAGA CGATAAACTC GTGGCCTGGG GCGATGATAC CTATAAACAG
TACCTCGAAG CCGGCACCGA TATCGTCAGC CGCACCGCCA AAGAAGCCGA AAGCTCAAGT
AAAAATTGA
 
Protein sequence
MKSKTSVIIG SIFAAYVAFV AVVVLVYEPT PDEMDWEDRQ VYNSQKLNEL TLGQDIATVK 
TLFGKADFTE AKSLKDGQLQ VLFYRTHHEK SDGVTTKEEC TPLIFKDDKL VAWGDDTYKQ
YLEAGTDIVS RTAKEAESSS KN