| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Shewana3_2870 |
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| Symbol | |
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| ID | 4478745 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Shewanella sp. ANA-3 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_008577 |
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| Strand | - |
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| Start bp | 3432126 |
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| End bp | 3433793 |
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| Gene Length | 1668 bp |
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| Protein Length | 555 aa |
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| Translation table | 11 |
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| GC content | 46% |
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| IMG OID | 639727476 |
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| Product | diguanylate cyclase |
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| Protein accession | YP_870503 |
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| Protein GI | 117921311 |
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| COG category | [T] Signal transduction mechanisms |
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| COG ID | [COG2199] FOG: GGDEF domain |
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| TIGRFAM ID | [TIGR00254] diguanylate cyclase (GGDEF) domain |
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Plasmid Coverage information |
| Num covering plasmid clones | 15 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 10 |
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| Fosmid unclonability p-value | 0.00315586 |
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| Fosmid Hitchhiker | Yes |
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| Fosmid clonability | hitchhiker |
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Sequence |
| Gene sequence | ATGAGTAAAC CTAACTTGCA ACATTTTTGG TGCTTTTTGC TGCTTCTTTG GACATTTAGT
CCGTTTGCCC ATAGCGCTGA AATTGCGTTG GATTCCCCCT ATTTATTCCA TGCCGATGCG
AAACAGCTCC CTCCCGAGCA TTTTAATGAC GTGACCCAGT GGATGGGGCC ACTTGAGGAG
GCTCGGTCAG TCAGCCTTGC GGGCGGTGAC TATTGGATGG TATCACCCGT GATGGTCAAT
AGCCGTCAAA GCCATTGGGT GGTGGATGCC AGTAATTCGA TTGTGGAATC CGTTGATTAT
TGGTTACTTG GCAGTGATGG CTCAGTGCAA ACGGCCCATA GTGGTTACTA TGCGCCCTAT
GAATTTTTAT TCGATTACGG CCGTAAAGTG CGGCTGAATA TGGGGACCGA TTATTGGTTA
GTGACTCGGC TCAGTAGCCG CTATTATTCC TCCGCGCCCG AATTGGCTAT AGAGTCGGAA
GAAGTGCACC AGTTAACCAA CGACCGTGTG GCCATGGCGA TACTGATTTG TTTAGGGGGA
TTGCTCTTTA TCGCTCTATA CAATCTACTG ATTTACATCT CTATTTTTGA TAAAGCCTTC
TTATACTATG GTCTTTATGT ATTGACCTAT TTTGGTGGCT GGGCACTGAC CTTCCATTTA
CCGGCGCATC TATTTAACTT CCATCAGCTT GAATTACATC ATCTGTTTTT TATCAGCTTG
CCGATATTTA ACATCATGTT CTACAAGCAC TTCTTACAGT TACCTAGCTA TTCGCCTAGA
TTATGGCGGC TTAGCCAATA TTTATTAGTC GCGTGTATTT TAGCCTTGCC GACCAGTATT
TGGTTATTGC CCTATACCGC GATTATTGCC TCTGTCTTAA TCATGCTGTG GATTGCGTTA
GCGATCACCT GTGGCAATGT GTGCTTGATG AAAGGCTTTG CCCCCGCGCG CTATTTCATC
ATGGCCTTTA GTTGTTTGCT GTTGCCTGCG GTGATTATTC TTCCGGGCAA TATGGGGATC
ACCCCTGATT TTATTGAACA TGCCGAGTTT GCGACACTAC TGGGTGGCAC TGTGGATGCT
TTGCTGTTAT CTCTTGCGTT AGCGAATAAG CTCAAACTGT TGGCCGAAGA GCGCAAGGCC
CACATTGAAG AACTCGGTAT CGCTTGGGAG AAGGCCAGAC TCGATGGTTT AACTCGAGTC
GGTAATCGTT ATGCCTTTGA TGAATATATG AATTCGCAAT TAACCTTTGC CGATAAGGTT
GTACAACCAA CGGCCTTGGT GCTGCTTAAT GTCGACAGTC TTAAAATGGT GAACGATACC
TTAGGGCATC AGGAAGGAGA CCGTTTACTG CAAAATCTAG TGCAGTTTTT ACAGGCGACC
AATATTGCTC ACCTTAAGAT TTACCGGATC AGCGGCGATG AATTTGTGCT TATTCTGCCC
GCAAATGGCA TGGGGATCTT AACCAGCAGC TTAAAGGGAT TAACGGCGCA ATTTGCCGCC
GAAGGCTTAA AGGATTGTCA GTTTAGTTTT GGCTTTGCCA TCAATAGCGA TGTGGCCGAA
CCCCACGAGT GGCTACGCTG CGCCGACAGC AATTTGTATC AGTCACGAAT GGAAAAACGT
CGTCAAGAAT TCGCCGATAC CCGCGCGGGT GAGATAGTCT CTATTTAA
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| Protein sequence | MSKPNLQHFW CFLLLLWTFS PFAHSAEIAL DSPYLFHADA KQLPPEHFND VTQWMGPLEE
ARSVSLAGGD YWMVSPVMVN SRQSHWVVDA SNSIVESVDY WLLGSDGSVQ TAHSGYYAPY
EFLFDYGRKV RLNMGTDYWL VTRLSSRYYS SAPELAIESE EVHQLTNDRV AMAILICLGG
LLFIALYNLL IYISIFDKAF LYYGLYVLTY FGGWALTFHL PAHLFNFHQL ELHHLFFISL
PIFNIMFYKH FLQLPSYSPR LWRLSQYLLV ACILALPTSI WLLPYTAIIA SVLIMLWIAL
AITCGNVCLM KGFAPARYFI MAFSCLLLPA VIILPGNMGI TPDFIEHAEF ATLLGGTVDA
LLLSLALANK LKLLAEERKA HIEELGIAWE KARLDGLTRV GNRYAFDEYM NSQLTFADKV
VQPTALVLLN VDSLKMVNDT LGHQEGDRLL QNLVQFLQAT NIAHLKIYRI SGDEFVLILP
ANGMGILTSS LKGLTAQFAA EGLKDCQFSF GFAINSDVAE PHEWLRCADS NLYQSRMEKR
RQEFADTRAG EIVSI
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