Gene Shewana3_2863 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagShewana3_2863 
Symbol 
ID4478738 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameShewanella sp. ANA-3 
KingdomBacteria 
Replicon accessionNC_008577 
Strand
Start bp3423499 
End bp3424206 
Gene Length708 bp 
Protein Length235 aa 
Translation table11 
GC content50% 
IMG OID639727469 
Producthypothetical protein 
Protein accessionYP_870496 
Protein GI117921304 
COG category[S] Function unknown 
COG ID[COG5587] Uncharacterized conserved protein 
TIGRFAM ID[TIGR02453] conserved hypothetical protein TIGR02453 


Plasmid Coverage information

Num covering plasmid clones21 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones13 
Fosmid unclonability p-value0.0222536 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGACTAAGC GAACCGCACA ACCCCAAACC GAGTTGGCAT TTACGGCCGC CAGCTTAGAT 
TTTCTCAAAC TGCTGGCGCT CAATAACTCC CGTGACTGGT TTAAAGCCCA TCAGGAAGAA
TATGAAAGTA AGGTCAGAAC CCCTGCGCTG CGTTTTATCG AGCAAATTCA GCCCGATATT
GTTGCTATTT CCCCAAGATT AACGGCGGTT GCCAAAAAAG TCGGTGGCAG CTTAATGCGC
CCACAGCGCG ATAGCCGCTT TAGCAACGAC AAAACGCCCT ACAAGACCAA TGTGGGGATC
CAGTTTCGGC ATTTTCAGGG CAAAGATGTG CATGCACCAG GGCTGTATTT ACACATTGCC
GAGGATGGAT GTTTTATTGC CGCCGGTATT TGGCATCCCG AATCCAAGGT GCTGAATGCC
ATTCGGACTT GTATCGATGA AAACCCCAAC GGCTATAAAA AGGCGCTGCA GACCTTAACC
AGTCAAGGAT TTGTGATGGA TGGTGATAGT TTGACTCGCC CGCCTAAGGG ATTCGATAAA
CATCACCCAA TGCTAGACGA GCTGAAACGT AAGGACTTTA TCGCGCTAAA ACCAATCCCC
TTCGAGCGAC TCTGCCAAGC CGATGCCGCC CGCTACTGCG CCGAACAATT CGCCCACTGT
AGCCAATTGA TGGCCTACTT GTGCTTCGCC CTCGAATTAG ACTTTTAG
 
Protein sequence
MTKRTAQPQT ELAFTAASLD FLKLLALNNS RDWFKAHQEE YESKVRTPAL RFIEQIQPDI 
VAISPRLTAV AKKVGGSLMR PQRDSRFSND KTPYKTNVGI QFRHFQGKDV HAPGLYLHIA
EDGCFIAAGI WHPESKVLNA IRTCIDENPN GYKKALQTLT SQGFVMDGDS LTRPPKGFDK
HHPMLDELKR KDFIALKPIP FERLCQADAA RYCAEQFAHC SQLMAYLCFA LELDF