Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Shewana3_2863 |
Symbol | |
ID | 4478738 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Shewanella sp. ANA-3 |
Kingdom | Bacteria |
Replicon accession | NC_008577 |
Strand | + |
Start bp | 3423499 |
End bp | 3424206 |
Gene Length | 708 bp |
Protein Length | 235 aa |
Translation table | 11 |
GC content | 50% |
IMG OID | 639727469 |
Product | hypothetical protein |
Protein accession | YP_870496 |
Protein GI | 117921304 |
COG category | [S] Function unknown |
COG ID | [COG5587] Uncharacterized conserved protein |
TIGRFAM ID | [TIGR02453] conserved hypothetical protein TIGR02453 |
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Plasmid Coverage information |
Num covering plasmid clones | 21 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 13 |
Fosmid unclonability p-value | 0.0222536 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGACTAAGC GAACCGCACA ACCCCAAACC GAGTTGGCAT TTACGGCCGC CAGCTTAGAT TTTCTCAAAC TGCTGGCGCT CAATAACTCC CGTGACTGGT TTAAAGCCCA TCAGGAAGAA TATGAAAGTA AGGTCAGAAC CCCTGCGCTG CGTTTTATCG AGCAAATTCA GCCCGATATT GTTGCTATTT CCCCAAGATT AACGGCGGTT GCCAAAAAAG TCGGTGGCAG CTTAATGCGC CCACAGCGCG ATAGCCGCTT TAGCAACGAC AAAACGCCCT ACAAGACCAA TGTGGGGATC CAGTTTCGGC ATTTTCAGGG CAAAGATGTG CATGCACCAG GGCTGTATTT ACACATTGCC GAGGATGGAT GTTTTATTGC CGCCGGTATT TGGCATCCCG AATCCAAGGT GCTGAATGCC ATTCGGACTT GTATCGATGA AAACCCCAAC GGCTATAAAA AGGCGCTGCA GACCTTAACC AGTCAAGGAT TTGTGATGGA TGGTGATAGT TTGACTCGCC CGCCTAAGGG ATTCGATAAA CATCACCCAA TGCTAGACGA GCTGAAACGT AAGGACTTTA TCGCGCTAAA ACCAATCCCC TTCGAGCGAC TCTGCCAAGC CGATGCCGCC CGCTACTGCG CCGAACAATT CGCCCACTGT AGCCAATTGA TGGCCTACTT GTGCTTCGCC CTCGAATTAG ACTTTTAG
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Protein sequence | MTKRTAQPQT ELAFTAASLD FLKLLALNNS RDWFKAHQEE YESKVRTPAL RFIEQIQPDI VAISPRLTAV AKKVGGSLMR PQRDSRFSND KTPYKTNVGI QFRHFQGKDV HAPGLYLHIA EDGCFIAAGI WHPESKVLNA IRTCIDENPN GYKKALQTLT SQGFVMDGDS LTRPPKGFDK HHPMLDELKR KDFIALKPIP FERLCQADAA RYCAEQFAHC SQLMAYLCFA LELDF
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