| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Shewana3_2798 |
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| Symbol | |
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| ID | 4479785 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Shewanella sp. ANA-3 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_008577 |
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| Strand | + |
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| Start bp | 3341742 |
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| End bp | 3342632 |
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| Gene Length | 891 bp |
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| Protein Length | 296 aa |
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| Translation table | 11 |
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| GC content | 48% |
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| IMG OID | 639727404 |
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| Product | diguanylate cyclase |
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| Protein accession | YP_870431 |
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| Protein GI | 117921239 |
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| COG category | [T] Signal transduction mechanisms |
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| COG ID | [COG2199] FOG: GGDEF domain |
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| TIGRFAM ID | [TIGR00254] diguanylate cyclase (GGDEF) domain |
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Plasmid Coverage information |
| Num covering plasmid clones | 22 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 19 |
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| Fosmid unclonability p-value | 0.400651 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGGACTTTG GCTTAGCGAC AACCTTATAT CCAGACGATT ATAACTATCA AACAGAGGCG
TATCGCCCAA CAACGTCGTC ATTGGATTTA GTTCAAGTGA TCCAGCAACT GCATGCCAGC
CTAGATCCGC GGACAGTCTT TGCCTGCTAC GGCAAAGTGC TAGGACAACA TCTGCCCGTC
CAAGGTGTTC GCCTGCAAGC CGAGCAACAA AAATTAAGCT GGGGCAAACG TTATGGGATC
AGTCTGAAAC GACAGATCAT CTGTGGCGGC ACCCCACTGA CACTGCAGTA TCAACTGCTG
ACGCCGCTCA CACCTTCGCA GACCATTATC CTGCAAGAGA TTGAGCCCTT GCTGCTGCAA
CCATTATTAA ATGCCATGCA GTATCAAGAG ATGTCGATGC AGGCGATGTT CGACTCCCTC
ACCGGCCTTG GCAATCGTCA TTATTACACT CAAAGTTTGA AAAATGCGGT GGCCAGAGCC
CACAGAAAAC AAGGCGCGGT ATCACTTATC GTATTGGATT TGGATAATTT TAAGCAGCTT
AACGATAGGT ATGGTCACAA ATGCGGTGAT TATATTTTGA AGGAGTTTGG AGACATTATC
CGTAGCAGTA TCCGCAGTAC AGATCAGGCC TTCCGTATCG GAGGCGACGA GTTTGTGGTG
ATAGTGCAAG GCAATATTCA TGCGGCAGGC TTACTGTGCG AACGTATCGT CACAGCGACC
AATGCCCATG CGAGTTTCCA TCAATTTGGC GTAAGCAGTA GCTTAGGTGC GGCTGAGGCG
AGCGATACAA TGGAAGCCGA ACAACTCTAC GAGCAAGCGG ATAAAACCTT GTATCAAGCC
AAAGCCTCGG GTCGTAATTG CTACAAGTTA AGTCCAGCCC AACTATCTTA A
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| Protein sequence | MDFGLATTLY PDDYNYQTEA YRPTTSSLDL VQVIQQLHAS LDPRTVFACY GKVLGQHLPV
QGVRLQAEQQ KLSWGKRYGI SLKRQIICGG TPLTLQYQLL TPLTPSQTII LQEIEPLLLQ
PLLNAMQYQE MSMQAMFDSL TGLGNRHYYT QSLKNAVARA HRKQGAVSLI VLDLDNFKQL
NDRYGHKCGD YILKEFGDII RSSIRSTDQA FRIGGDEFVV IVQGNIHAAG LLCERIVTAT
NAHASFHQFG VSSSLGAAEA SDTMEAEQLY EQADKTLYQA KASGRNCYKL SPAQLS
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