| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Shewana3_2789 |
|---|
| Symbol | |
|---|
| ID | 4479776 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Shewanella sp. ANA-3 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_008577 |
|---|
| Strand | - |
|---|
| Start bp | 3329159 |
|---|
| End bp | 3329893 |
|---|
| Gene Length | 735 bp |
|---|
| Protein Length | 244 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 50% |
|---|
| IMG OID | 639727395 |
|---|
| Product | hypothetical protein |
|---|
| Protein accession | YP_870422 |
|---|
| Protein GI | 117921230 |
|---|
| COG category | [S] Function unknown |
|---|
| COG ID | [COG1434] Uncharacterized conserved protein |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 22 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 13 |
|---|
| Fosmid unclonability p-value | 0.0155604 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGTTTTGGG TTAAGAAAGT TGTCTCTCAG GCAATCATGC CTATTCCATT TATTCTGTTG
TTATTACTGC TGTCTTTGTT GATTTGGCGC AAACCTAGGT TAGCAAAATG GGCCATTGGC
GGTGTATTTA CGCTGCTTTT AGTGCTTAGC AGTCAATTAA GTGTCGACTA TCTCGTAAAA
CCGCTCGAGG CTCAATATCC CATTAATTCC ACTCCTTTTG CGGGTACCTG TGTGGTGATG
GTGCTGGGTT CTGCTCACTC CGATATCCCA GGTGCTACGG CAGTACAATC TTTATCGACG
GTCGCCTTAG CGCGGCTAAC GGAAGGACTA AGACAACTTA AATTAGGGCA AGACTGCACC
TTAGTGGTCA GTGGCTGGGA AGGCGAGCTC ACGCAGCATC CCCACGCTGA AGTGATGGCA
AAGGCGGCGG TTGAACTCGG CGTTGATGCG ACACGTATCG TTCAATTGCC TCTCCCGCGC
GACACGATTG AAGAGGCGCA CTATTTTAAA GAACACTTTG GTGATCAAGC AGTACGATTA
GTTACCTCTG CTTCCCATAT GCCAAGGTCG ATGGCGATCT TTAGCGGTCA AGGATTAACG
GCGAGCGCCG CGCCGACGGA TTTTAGGGCA AGAGACGGTT TCTACTGGCG CTTGACTGCG
GATAACTTAC TCGCCTCGCA ACGGGCGATA CATGAATACA TAGGCCGTTT GTGGCTCTGG
ATAAAACAGG GATAA
|
|---|
| Protein sequence | MFWVKKVVSQ AIMPIPFILL LLLLSLLIWR KPRLAKWAIG GVFTLLLVLS SQLSVDYLVK
PLEAQYPINS TPFAGTCVVM VLGSAHSDIP GATAVQSLST VALARLTEGL RQLKLGQDCT
LVVSGWEGEL TQHPHAEVMA KAAVELGVDA TRIVQLPLPR DTIEEAHYFK EHFGDQAVRL
VTSASHMPRS MAIFSGQGLT ASAAPTDFRA RDGFYWRLTA DNLLASQRAI HEYIGRLWLW
IKQG
|
|---|
| |