| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Shewana3_2786 |
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| Symbol | |
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| ID | 4479773 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Shewanella sp. ANA-3 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_008577 |
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| Strand | + |
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| Start bp | 3324641 |
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| End bp | 3325654 |
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| Gene Length | 1014 bp |
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| Protein Length | 337 aa |
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| Translation table | 11 |
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| GC content | 49% |
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| IMG OID | 639727392 |
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| Product | LysR family transcriptional regulator |
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| Protein accession | YP_870419 |
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| Protein GI | 117921227 |
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| COG category | [K] Transcription |
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| COG ID | [COG0583] Transcriptional regulator |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 17 |
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| Plasmid unclonability p-value | 0.989304 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 11 |
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| Fosmid unclonability p-value | 0.00367325 |
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| Fosmid Hitchhiker | Yes |
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| Fosmid clonability | hitchhiker |
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Sequence |
| Gene sequence | ATGTCTGCAT ATCGGGCGCA CAGGCAAGGC AATCCCATGA GCAATCCCTT ACTAAAACAA
ATCTGTGAAC TCGACGTCTT TACCCTGCTC GTCTTTAAAA GCATTTTTGA TACAGGCCAT
GCTAATAGTG CGGCTAAAGC ATTAAATGTA TCGGCTCCTA AGATTAGCCG TTGCCTGAAT
GCCCTACGAT TAACGTTTAA CGATGAGCTA TTCTACCGCC GTCAACAGGG GCTCAAACCC
ACCCCTTTAG CCGAGAGCCT CTATTTTGCT ATCTGCCAGT TTACCGATTC GGTATATCAC
TTAGAGCAAT CCGCACTACA AATTCAAAAT GCGACCAGCC ATGTTGAGCG GCCGCTACAA
ATAGCGGTGA GTAATGGGTT GCTGAGTTTT TTAGCGCCGC AGCTCAGTTC CCCCGAAGCA
GTGGATGAGT TAGGGCAAGT CAGGTTACAT AAGTGGCAGG AAAACAGTGC CGAATTAATC
CACGCCGGAG AATTAGATTT TGGGATCTCA CTGGAGAATG CAGAGAGCAA AGAGTTAACC
GTCAGTCGCT TGGGTGGGAT CTCGATGATT TACGTGGTCG CCGCTAAGCA GCATCCCATA
TGGCAAGTTC AAACCCATAT CAGTCTAGAA CAGATATGTC GCCATCCGTT CTTGTGCATT
GAACTCAAAG GATTTAACAG CAGAATCGAT CCTCTCGAGC TCTTCTGTCA GCGCCAAGGG
ATCTTATTGC CTTCGCTCGA AAAGGTACTC GATAGAGAAG AATGGTACGC TCATCTACTG
ACCATGCAGA GTGTGGCCTT CTGCTCAGGT ATCGATATGC ACACGGTCAA ACATATGCCG
GGGCTCAAAT TAGCACCGCT ACCGCTCACC GAACTGCATC GCCTGCACGA TACTATTATG
CCGCCACAAT ATTATTTAGT TGAAAAGCCT CGCAGCCACC GACGTTACAG CCCTGCCCAA
TGTGAACTCG TCGTCAGCTC CTTACTGACG GCGCTTAGCC AAACTTACGC CTAA
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| Protein sequence | MSAYRAHRQG NPMSNPLLKQ ICELDVFTLL VFKSIFDTGH ANSAAKALNV SAPKISRCLN
ALRLTFNDEL FYRRQQGLKP TPLAESLYFA ICQFTDSVYH LEQSALQIQN ATSHVERPLQ
IAVSNGLLSF LAPQLSSPEA VDELGQVRLH KWQENSAELI HAGELDFGIS LENAESKELT
VSRLGGISMI YVVAAKQHPI WQVQTHISLE QICRHPFLCI ELKGFNSRID PLELFCQRQG
ILLPSLEKVL DREEWYAHLL TMQSVAFCSG IDMHTVKHMP GLKLAPLPLT ELHRLHDTIM
PPQYYLVEKP RSHRRYSPAQ CELVVSSLLT ALSQTYA
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