Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Shewana3_2782 |
Symbol | |
ID | 4479769 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Shewanella sp. ANA-3 |
Kingdom | Bacteria |
Replicon accession | NC_008577 |
Strand | + |
Start bp | 3321505 |
End bp | 3322413 |
Gene Length | 909 bp |
Protein Length | 302 aa |
Translation table | 11 |
GC content | 48% |
IMG OID | 639727388 |
Product | UDP-glucose pyrophosphorylase |
Protein accession | YP_870415 |
Protein GI | 117921223 |
COG category | [M] Cell wall/membrane/envelope biogenesis |
COG ID | [COG1210] UDP-glucose pyrophosphorylase |
TIGRFAM ID | [TIGR01099] UTP-glucose-1-phosphate uridylyltransferase |
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Plasmid Coverage information |
Num covering plasmid clones | 14 |
Plasmid unclonability p-value | 0.303807 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 7 |
Fosmid unclonability p-value | 0.000070126 |
Fosmid Hitchhiker | Yes |
Fosmid clonability | hitchhiker |
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Sequence |
Gene sequence | ATGAAACAAC ATCAAATTCG TAAAGCCGTT ATTCCCGTCG CTGGACTTGG CACTCGTATG CTTCCTGCGA CCAAGGCAAT TCCTAAGGAA ATGCTACCCG TTGTTGATAA ACCCTTGATC CAATATGTGG TTAGTGAAGC CATTGATGCG GGTATCAAAG AAATTGTCCT CGTGACCCAC GCAAGTAAAA ACTCTATCGA AAACCATTTC GACACCAGTT TTGAATTAGA AGCGCAATTA GAGCGCCGCG TGAAGCGTCA ATTACTCGAA GCGGTACAAT CCATTTGCCC AAAAGACGTG ACAGTGATCA GCGTGCGTCA ATCCCAAGCT AAAGGCTTAG GCCATGCGAT TTTATGTGCC AAATCCGTTG TAGGTGATGC GCCGTTTGCC GTGTTGTTGC CGGATGTGAT TATCGATGAT GCCAGCTGCA ACCTGAAAAC CGACAACTTG GCCGCCATGG TGAGCCTGTT TGATGAAACC CAAGTGGGCC AAATCATGGT TGAAGGCGTA CCACATCATT TAGTGAACCA ATATGGTATT GCGGATGTGA ATGGCCACGA TCTACAACCT GGTGAGTCAG AGCCATTGGT CGAACTCGTT GAAAAGCCAC CGGTTGACGA AGCACCGTCT AACTTAGCCG TGGTGGGTCG TTACGTGTTG CCCGCTGCGA TTTGGCCACT GCTGGCTAAA ACCCCTGCAG GCGCGGGTGA TGAAATCCAG TTAACCGACG CCATTGCGAT GTTGATGAAA CAAGAAACCG TAAACGCTTA CTACATGCAA GGTAAGAGTC ATGACTGCGG TAACAAGCAA GGCTATATGC GCGCTAACGT GGAATACGCC CTGCGCCACA GCGAAATCGG TGAAGATTTT GCGCAATATT TAAAAACAGT CGTAAAAGGA ATTAAATAA
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Protein sequence | MKQHQIRKAV IPVAGLGTRM LPATKAIPKE MLPVVDKPLI QYVVSEAIDA GIKEIVLVTH ASKNSIENHF DTSFELEAQL ERRVKRQLLE AVQSICPKDV TVISVRQSQA KGLGHAILCA KSVVGDAPFA VLLPDVIIDD ASCNLKTDNL AAMVSLFDET QVGQIMVEGV PHHLVNQYGI ADVNGHDLQP GESEPLVELV EKPPVDEAPS NLAVVGRYVL PAAIWPLLAK TPAGAGDEIQ LTDAIAMLMK QETVNAYYMQ GKSHDCGNKQ GYMRANVEYA LRHSEIGEDF AQYLKTVVKG IK
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