Gene Shewana3_2782 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagShewana3_2782 
Symbol 
ID4479769 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameShewanella sp. ANA-3 
KingdomBacteria 
Replicon accessionNC_008577 
Strand
Start bp3321505 
End bp3322413 
Gene Length909 bp 
Protein Length302 aa 
Translation table11 
GC content48% 
IMG OID639727388 
ProductUDP-glucose pyrophosphorylase 
Protein accessionYP_870415 
Protein GI117921223 
COG category[M] Cell wall/membrane/envelope biogenesis 
COG ID[COG1210] UDP-glucose pyrophosphorylase 
TIGRFAM ID[TIGR01099] UTP-glucose-1-phosphate uridylyltransferase 


Plasmid Coverage information

Num covering plasmid clones14 
Plasmid unclonability p-value0.303807 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones
Fosmid unclonability p-value0.000070126 
Fosmid HitchhikerYes 
Fosmid clonabilityhitchhiker 
 

Sequence

Gene sequence
ATGAAACAAC ATCAAATTCG TAAAGCCGTT ATTCCCGTCG CTGGACTTGG CACTCGTATG 
CTTCCTGCGA CCAAGGCAAT TCCTAAGGAA ATGCTACCCG TTGTTGATAA ACCCTTGATC
CAATATGTGG TTAGTGAAGC CATTGATGCG GGTATCAAAG AAATTGTCCT CGTGACCCAC
GCAAGTAAAA ACTCTATCGA AAACCATTTC GACACCAGTT TTGAATTAGA AGCGCAATTA
GAGCGCCGCG TGAAGCGTCA ATTACTCGAA GCGGTACAAT CCATTTGCCC AAAAGACGTG
ACAGTGATCA GCGTGCGTCA ATCCCAAGCT AAAGGCTTAG GCCATGCGAT TTTATGTGCC
AAATCCGTTG TAGGTGATGC GCCGTTTGCC GTGTTGTTGC CGGATGTGAT TATCGATGAT
GCCAGCTGCA ACCTGAAAAC CGACAACTTG GCCGCCATGG TGAGCCTGTT TGATGAAACC
CAAGTGGGCC AAATCATGGT TGAAGGCGTA CCACATCATT TAGTGAACCA ATATGGTATT
GCGGATGTGA ATGGCCACGA TCTACAACCT GGTGAGTCAG AGCCATTGGT CGAACTCGTT
GAAAAGCCAC CGGTTGACGA AGCACCGTCT AACTTAGCCG TGGTGGGTCG TTACGTGTTG
CCCGCTGCGA TTTGGCCACT GCTGGCTAAA ACCCCTGCAG GCGCGGGTGA TGAAATCCAG
TTAACCGACG CCATTGCGAT GTTGATGAAA CAAGAAACCG TAAACGCTTA CTACATGCAA
GGTAAGAGTC ATGACTGCGG TAACAAGCAA GGCTATATGC GCGCTAACGT GGAATACGCC
CTGCGCCACA GCGAAATCGG TGAAGATTTT GCGCAATATT TAAAAACAGT CGTAAAAGGA
ATTAAATAA
 
Protein sequence
MKQHQIRKAV IPVAGLGTRM LPATKAIPKE MLPVVDKPLI QYVVSEAIDA GIKEIVLVTH 
ASKNSIENHF DTSFELEAQL ERRVKRQLLE AVQSICPKDV TVISVRQSQA KGLGHAILCA
KSVVGDAPFA VLLPDVIIDD ASCNLKTDNL AAMVSLFDET QVGQIMVEGV PHHLVNQYGI
ADVNGHDLQP GESEPLVELV EKPPVDEAPS NLAVVGRYVL PAAIWPLLAK TPAGAGDEIQ
LTDAIAMLMK QETVNAYYMQ GKSHDCGNKQ GYMRANVEYA LRHSEIGEDF AQYLKTVVKG
IK