| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Shewana3_2757 |
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| Symbol | |
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| ID | 4479401 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Shewanella sp. ANA-3 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_008577 |
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| Strand | + |
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| Start bp | 3291098 |
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| End bp | 3292117 |
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| Gene Length | 1020 bp |
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| Protein Length | 339 aa |
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| Translation table | 11 |
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| GC content | 50% |
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| IMG OID | 639727363 |
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| Product | diguanylate cyclase |
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| Protein accession | YP_870390 |
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| Protein GI | 117921198 |
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| COG category | [T] Signal transduction mechanisms |
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| COG ID | [COG3706] Response regulator containing a CheY-like receiver domain and a GGDEF domain |
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| TIGRFAM ID | [TIGR00229] PAS domain S-box
[TIGR00254] diguanylate cyclase (GGDEF) domain |
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Plasmid Coverage information |
| Num covering plasmid clones | 24 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 36 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGACAAACT CACCGAAACT GGCACGCCAA CAACCCGCCT TATCCATTGT CGATGATGCT
GCATTGGCCG CAACTCAGCA TGCAAAGGCT GCCGAGCTAC CGCTGAACTT TTTCGAGCAT
TCTTCCCTCG AGACCATTGA ACTCTTTATT CAACATTTAA CCGAGCCAGT GATCCTAGTG
AATGCCAACG GCTTTATCCG TTCGTGCAAT CAACGTAGTG CCGAGCTGCT CGATTGCCCG
CAGGCGAGTT TAAAGGGCCA AGACTGGCGC AATTTTTTGA CCGAACATCA TCAAGCGCGC
TACGACAATC TCCTGAGTCA CGATGTGCAA CTAGGCACCA ATTGTGGTCA CCCCGTGCAG
CACCCTGCGC AGGAAACCAC GCTGATCTGC GCCTCTGGCA AAGCCAAAGA TGTTGAGTTG
TCTATCTCTT ATATTCCTAG CCATGAACCT GTGTTTGTGA TGGTGATGCA CGATTTAACT
CAACATAAGG CGGAAAACCT CAAGCTGCGT AAATTGGCCG CCACCGACTC CCTCACCCAA
CTGGCGAACC GTCGCTATTT TGATGAAATG CTGCAACAGC AATGGGAAGA ATGCACCGCC
AAACTGCGTC CCATCAGCGT AGTCATTATC GATGTGGATT ATTTTAAGGT GTTTAATGAC
CAGTTTGGTC ATATCCAAGG TGATGAATGC CTTAGAAAAA TCGCCAAAGT GATCGCCAAT
ATTGTGCCTA TCGACATCGG TCTTGCGGCC CGTTACGGCG GCGAAGAGTT TGCGCTGATC
CTGCCTAATC ACAATGCCAA AATGGCGCTG ACCATAGCGC AAAAAATTCA GCAAGAGATT
AATGATATTC GCTTTACTGA CCAAGGACTT AGGGATTATG TCTCGATAAG CGCCAGCCAA
GGGATTGCCA GTGAAGTTAA TGGCCAGTTC CGTACTTCAC TCGCCATGGT GTGCGCCGCC
GATACCGCGC TTTACCGCGC CAAGGCCGAT GGTCGTGACC GGATAAACGC CTCACTGTAG
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| Protein sequence | MTNSPKLARQ QPALSIVDDA ALAATQHAKA AELPLNFFEH SSLETIELFI QHLTEPVILV
NANGFIRSCN QRSAELLDCP QASLKGQDWR NFLTEHHQAR YDNLLSHDVQ LGTNCGHPVQ
HPAQETTLIC ASGKAKDVEL SISYIPSHEP VFVMVMHDLT QHKAENLKLR KLAATDSLTQ
LANRRYFDEM LQQQWEECTA KLRPISVVII DVDYFKVFND QFGHIQGDEC LRKIAKVIAN
IVPIDIGLAA RYGGEEFALI LPNHNAKMAL TIAQKIQQEI NDIRFTDQGL RDYVSISASQ
GIASEVNGQF RTSLAMVCAA DTALYRAKAD GRDRINASL
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