| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Shewana3_2687 |
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| Symbol | |
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| ID | 4478454 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Shewanella sp. ANA-3 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_008577 |
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| Strand | - |
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| Start bp | 3214353 |
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| End bp | 3215249 |
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| Gene Length | 897 bp |
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| Protein Length | 298 aa |
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| Translation table | 11 |
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| GC content | 38% |
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| IMG OID | 639727293 |
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| Product | NAD-dependent DNA ligase |
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| Protein accession | YP_870320 |
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| Protein GI | 117921128 |
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| COG category | [L] Replication, recombination and repair |
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| COG ID | [COG0272] NAD-dependent DNA ligase (contains BRCT domain type II) |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 27 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 22 |
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| Fosmid unclonability p-value | 0.835433 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGAGAGATG AAAACCCGCT ACTCGACAAA GATGGTCAAC CCTACAGTCG AGTGAACTTT
AAGCACAATA AACAAAAAGC TTTATGTTCG TTAAAAGGTG TTTTGACCGG TGTAATTTGC
GATCAAAAGC TGAAGCCCTC TGAGTTGCTA TACCTTGAGT CGTGGCTTAA CGACAATGAG
TTTTTACAGG ATGACGCAGA TACTGCGGAC TTACTCGATG CTATTGGTGA TGTGCTAAAC
GATGGGATGA TTACTGATGA GGAACATGAA GATATTTTCT GTTTGCTTGA AGATGTTATC
GCTTATAAAA CGTTAGATGA CTCTAAGTGT AAAGATCATA TGAATGTTCT TATCGGCATT
TTAAAAGGTA TTACAGCCGA TGCCGATATT AATGATGCTG AAGTTTTGTT TTTTAAAAAA
TGGCTTAGTG AAAACCCCGA TATTGCTAAT ATTTGGCCTG TTCCAAAATT AACTGAAAAA
CTTGATCAAA TTCTTCTAGA TGGAGTGATT ACAAGTGAAG AGCGAAAAGA TCTATACCAA
TTAGTCACAA TGCTCATTGG CAATGACTTT AGCGAAACAG GTGATGCAGC AGACTCTCCT
ACCCAGAGCT TCGATAACAT CATGAATATT ACCCATAAGG ATAAATGTTT TTGTTTTACT
GGTAAGTTTA AACAATTAAA ACGAGTACAA CTTGAAGATA AAGCAAAAAG TTTGGGCGCG
GTAATAGCCA AGAAAATCCC TACGTTATCG ACTGACTATG TAGTCGTAGG CTCTTTGTCT
AGTCGAGATT GGTTGTATTC AAGTCATGGT CTAAAAATAC AACATGCTAA GAAGATGCAG
GAAAGTGGCC ACCATATTAG TATTATTTCT GAAGATCAGT GGCTAGCATC ACTCTAG
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| Protein sequence | MRDENPLLDK DGQPYSRVNF KHNKQKALCS LKGVLTGVIC DQKLKPSELL YLESWLNDNE
FLQDDADTAD LLDAIGDVLN DGMITDEEHE DIFCLLEDVI AYKTLDDSKC KDHMNVLIGI
LKGITADADI NDAEVLFFKK WLSENPDIAN IWPVPKLTEK LDQILLDGVI TSEERKDLYQ
LVTMLIGNDF SETGDAADSP TQSFDNIMNI THKDKCFCFT GKFKQLKRVQ LEDKAKSLGA
VIAKKIPTLS TDYVVVGSLS SRDWLYSSHG LKIQHAKKMQ ESGHHISIIS EDQWLASL
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