Gene Shewana3_2633 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagShewana3_2633 
Symbol 
ID4478396 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameShewanella sp. ANA-3 
KingdomBacteria 
Replicon accessionNC_008577 
Strand
Start bp3142399 
End bp3143091 
Gene Length693 bp 
Protein Length230 aa 
Translation table11 
GC content50% 
IMG OID639727236 
Producthypothetical protein 
Protein accessionYP_870266 
Protein GI117921074 
COG category[S] Function unknown 
COG ID[COG3110] Uncharacterized protein conserved in bacteria 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones20 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones11 
Fosmid unclonability p-value0.00306883 
Fosmid HitchhikerYes 
Fosmid clonabilityhitchhiker 
 

Sequence

Gene sequence
ATGAAATCAC TTTTGCCAAT CAGCAGCCTG CTAGTGCTAC TCGGCTCTGC CTCAGCCTTT 
GCCGCAGATC TGAATATCCC TATGTCCTTC GAATACCTTG CCCTCGATGG CAAAAAAGTC
GAGTCCAGTG TATTCAACCA TAAAAGCAGC TTAGAGTTGG CGCCCGGCAC TCACAAAATC
GCGATCCGTT ACCATGAGAT GGTTGAAGAC GATTTCAGTG ACAGCCAGAC CTTCGTTAAG
TCATCGCCTT TTATCGTGAC CTTAGAAGTG GACGGCGATC ATCAATATTA TTTGCAAGCC
GCAGAGGGCA AGGTCGTTAA AAAGCCTAAA ACCTTCGCTC AAAACCCACA AGTGGTGTTA
ACCCGTGCTG ATAAAGGTCA GGTGAATTAC CAAGTGACAA ACACCGATAT TGAAGAAGAG
AGCTTTGTCT CCCGTCTCTT TAGCGGTAAT CAAGCGGTAG ATGTGTCAGG TACTGCCGCC
GCAGCAACGG GCGCAGCAGG CACAGCGGCG GTTGTTGCCG CGCCAGCACC CACTTCGGCG
CAGGCAGCCG TTAACGCCAC CTCATTAACC GCTCCAGTTG ATACATCTAA AGCAGCGGGG
GCGAATCCAC AGCAAATGCT GCAATACTGG TGGTTACAGG CCGATGAGAA AACACGTAAA
GAATTTATGA GCTGGGCGAT TTCTCAGCTC TAA
 
Protein sequence
MKSLLPISSL LVLLGSASAF AADLNIPMSF EYLALDGKKV ESSVFNHKSS LELAPGTHKI 
AIRYHEMVED DFSDSQTFVK SSPFIVTLEV DGDHQYYLQA AEGKVVKKPK TFAQNPQVVL
TRADKGQVNY QVTNTDIEEE SFVSRLFSGN QAVDVSGTAA AATGAAGTAA VVAAPAPTSA
QAAVNATSLT APVDTSKAAG ANPQQMLQYW WLQADEKTRK EFMSWAISQL