Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Shewana3_2633 |
Symbol | |
ID | 4478396 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Shewanella sp. ANA-3 |
Kingdom | Bacteria |
Replicon accession | NC_008577 |
Strand | + |
Start bp | 3142399 |
End bp | 3143091 |
Gene Length | 693 bp |
Protein Length | 230 aa |
Translation table | 11 |
GC content | 50% |
IMG OID | 639727236 |
Product | hypothetical protein |
Protein accession | YP_870266 |
Protein GI | 117921074 |
COG category | [S] Function unknown |
COG ID | [COG3110] Uncharacterized protein conserved in bacteria |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 20 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 11 |
Fosmid unclonability p-value | 0.00306883 |
Fosmid Hitchhiker | Yes |
Fosmid clonability | hitchhiker |
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Sequence |
Gene sequence | ATGAAATCAC TTTTGCCAAT CAGCAGCCTG CTAGTGCTAC TCGGCTCTGC CTCAGCCTTT GCCGCAGATC TGAATATCCC TATGTCCTTC GAATACCTTG CCCTCGATGG CAAAAAAGTC GAGTCCAGTG TATTCAACCA TAAAAGCAGC TTAGAGTTGG CGCCCGGCAC TCACAAAATC GCGATCCGTT ACCATGAGAT GGTTGAAGAC GATTTCAGTG ACAGCCAGAC CTTCGTTAAG TCATCGCCTT TTATCGTGAC CTTAGAAGTG GACGGCGATC ATCAATATTA TTTGCAAGCC GCAGAGGGCA AGGTCGTTAA AAAGCCTAAA ACCTTCGCTC AAAACCCACA AGTGGTGTTA ACCCGTGCTG ATAAAGGTCA GGTGAATTAC CAAGTGACAA ACACCGATAT TGAAGAAGAG AGCTTTGTCT CCCGTCTCTT TAGCGGTAAT CAAGCGGTAG ATGTGTCAGG TACTGCCGCC GCAGCAACGG GCGCAGCAGG CACAGCGGCG GTTGTTGCCG CGCCAGCACC CACTTCGGCG CAGGCAGCCG TTAACGCCAC CTCATTAACC GCTCCAGTTG ATACATCTAA AGCAGCGGGG GCGAATCCAC AGCAAATGCT GCAATACTGG TGGTTACAGG CCGATGAGAA AACACGTAAA GAATTTATGA GCTGGGCGAT TTCTCAGCTC TAA
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Protein sequence | MKSLLPISSL LVLLGSASAF AADLNIPMSF EYLALDGKKV ESSVFNHKSS LELAPGTHKI AIRYHEMVED DFSDSQTFVK SSPFIVTLEV DGDHQYYLQA AEGKVVKKPK TFAQNPQVVL TRADKGQVNY QVTNTDIEEE SFVSRLFSGN QAVDVSGTAA AATGAAGTAA VVAAPAPTSA QAAVNATSLT APVDTSKAAG ANPQQMLQYW WLQADEKTRK EFMSWAISQL
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