Gene Shewana3_2631 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagShewana3_2631 
Symbol 
ID4478394 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameShewanella sp. ANA-3 
KingdomBacteria 
Replicon accessionNC_008577 
Strand
Start bp3140957 
End bp3141730 
Gene Length774 bp 
Protein Length257 aa 
Translation table11 
GC content50% 
IMG OID639727234 
Producthypothetical protein 
Protein accessionYP_870264 
Protein GI117921072 
COG category[R] General function prediction only 
COG ID[COG0730] Predicted permeases 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones21 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones11 
Fosmid unclonability p-value0.00352704 
Fosmid HitchhikerYes 
Fosmid clonabilityhitchhiker 
 

Sequence

Gene sequence
TTGGAGTTGT TACTCGAGCC CAGTAATTGG GCCCTGTTGG CTGTCATTGG CTTAATTGCA 
GGTTTTATCG ATGCAGTGGT CGGTGGTGGA GGCCTGCTCT CTATTCCAGC CCTGCTCACC
CTCGGGATCC CACCGCATAC CGCCTTAGGT ACCAATAAAT TTGCCGCCAG TTTTGGCTCC
TCCATGGCAG CTTGGACCTA TTATCGCCAG CATCTGCTCA AACCCAGTTT TTGGTATATG
GCGTTTATCG CCACCTTTAT TGGCGCGGTA CTTGGCAGTG TGTTTGTGTA CTTATTAAAT
GCCCAGTGGC TTGAAAAAGC CTTACCACTG CTCATTATTG GCATCGCGAT ATACAGCTTG
CTGAGCCCAA ATGCCATCTC GGATACCGAT TGCCAGGCAC CGACAAAAGC CCAATCTAAA
CTCAAACAAA GTCTGCAAGG GCTCTTGCTG GGTGCTTATG ATGGTTTTGC AGGCCCAGGC
ATTGGCGCCT TTTGGACTGT GAGTTCCGGT GCTTTATACA AATTACCGCT GTTGCATAGC
TGCGCGCTTG CCAAAGCCAT GACCTTTACC AGTAACTTGA CGGCGCTGGC GATCTTTGGC
TTTCTTGGGC AAGTCCATTG GCAAATCGGC CTGTGGATGG GGTTATCTAT GATGCTCGGC
TCCTTTATCG GCGCCCGCTG CGCGATAAAA TTTGGTATGC CTTTTATTCG GCCTTTGTTT
ATATTAATTG TCCTGTCAAT TGCCGCTAAT CTGGCGTGGA GCGCATGGTT TTGA
 
Protein sequence
MELLLEPSNW ALLAVIGLIA GFIDAVVGGG GLLSIPALLT LGIPPHTALG TNKFAASFGS 
SMAAWTYYRQ HLLKPSFWYM AFIATFIGAV LGSVFVYLLN AQWLEKALPL LIIGIAIYSL
LSPNAISDTD CQAPTKAQSK LKQSLQGLLL GAYDGFAGPG IGAFWTVSSG ALYKLPLLHS
CALAKAMTFT SNLTALAIFG FLGQVHWQIG LWMGLSMMLG SFIGARCAIK FGMPFIRPLF
ILIVLSIAAN LAWSAWF