| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Shewana3_2516 |
|---|
| Symbol | bioD |
|---|
| ID | 4477567 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Shewanella sp. ANA-3 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_008577 |
|---|
| Strand | - |
|---|
| Start bp | 3007834 |
|---|
| End bp | 3008529 |
|---|
| Gene Length | 696 bp |
|---|
| Protein Length | 231 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 47% |
|---|
| IMG OID | 639727114 |
|---|
| Product | dithiobiotin synthetase |
|---|
| Protein accession | YP_870151 |
|---|
| Protein GI | 117920959 |
|---|
| COG category | [H] Coenzyme transport and metabolism |
|---|
| COG ID | [COG0132] Dethiobiotin synthetase |
|---|
| TIGRFAM ID | [TIGR00347] dethiobiotin synthase |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 19 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 2 |
|---|
| Fosmid unclonability p-value | 0.0000000238987 |
|---|
| Fosmid Hitchhiker | Yes |
|---|
| Fosmid clonability | hitchhiker |
|---|
| |
Sequence |
| Gene sequence | ATGTTTTTTG TAACAGGTAC AGATACCGAC AGTGGTAAAA CCTTAGTGTC GACGGCACTG
TTAACCGCAT TCAATCGTGA AGCTGCTCGC ACAGGCGCTG CGCACTTAAG CCTTGGGGTA
AAACCTGTGG CCTCGGGATG TGAAACCACA GCGCAGGGCT TACGCAACAG TGATGCGTTA
AAACTGATGT CGGCCTCATC TTTAAAGCTC AGCTATGAGC AGGTCAATCC GATAAGCTTT
GAACCCGCCA TCGCGCCGCA TATTGCCGCA AAACAGCTTG AGGTTAATTT ATCTCCAGAG
GCGATTTTGG CAGAACTCGA CAGACAAGCC TTTGAGCAGG CTGATTTTTG CTTGATAGAA
GGTGCGGGTG GCTGGCGTTT GCCCTTAGGG GACGGGCGTT ATTTATCGGA ATTAGTGCAG
CAACTTAATT TGCCAGTGAT CTTGGTTGTG GGAATGAAAC TTGGCTGCTT AAATCATGCA
TTATTAACCC AAGAGGCGAT AATCGCCGAT GGCTTAACCG TGGCGGGTTG GGTGGCAAAT
TGCGTCGATC CCAATATGAG CGTGTTTGAT GAAAACTTAG CATCGCTTAA AGAGATGATG
ACATCGCCTT TCTTAGGTTG TGTTCCACAT CTTAAGCAGG CTGATGCAGA ACATGCCGCC
CATTTTATCG ATATTCAAGC TTTGTTGATG AAATAA
|
|---|
| Protein sequence | MFFVTGTDTD SGKTLVSTAL LTAFNREAAR TGAAHLSLGV KPVASGCETT AQGLRNSDAL
KLMSASSLKL SYEQVNPISF EPAIAPHIAA KQLEVNLSPE AILAELDRQA FEQADFCLIE
GAGGWRLPLG DGRYLSELVQ QLNLPVILVV GMKLGCLNHA LLTQEAIIAD GLTVAGWVAN
CVDPNMSVFD ENLASLKEMM TSPFLGCVPH LKQADAEHAA HFIDIQALLM K
|
|---|
| |