Gene Shewana3_2497 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagShewana3_2497 
Symbol 
ID4477548 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameShewanella sp. ANA-3 
KingdomBacteria 
Replicon accessionNC_008577 
Strand
Start bp2987714 
End bp2989018 
Gene Length1305 bp 
Protein Length434 aa 
Translation table11 
GC content50% 
IMG OID639727095 
Productaminoglycoside phosphotransferase 
Protein accessionYP_870132 
Protein GI117920940 
COG category[M] Cell wall/membrane/envelope biogenesis 
COG ID[COG0510] Predicted choline kinase involved in LPS biosynthesis 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones13 
Plasmid unclonability p-value0.403294 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones11 
Fosmid unclonability p-value0.00457096 
Fosmid HitchhikerYes 
Fosmid clonabilityhitchhiker 
 

Sequence

Gene sequence
ATGCCGCCTA TTGTTGATCA GGACAAAGAT ACGCTGCTTG CGGTATTAGC GCAGGCAGGG 
CTTACTGATA TCAGTCAAAT CCAGCCTTTA GCGCATGGAT TAAGTAACCA CAACTATCAT
ATTGAAACGC CGACAGCGCA TTATGTCTTG CGTGAAAACG CCGATGCCGC CGACAGCTTT
TGTTCGCGGG AGCAAGAGTT GTTCTATTGG CGCCATCTTG CCAAGGCAAA GCTTGCCCCC
GAGTTACTGT GGGTGAGTGG CGATCAGCGT TATTACCTCA GCCAGTTTAT CTTCGCGCAA
TCTCTGCCAA GCCTTCCATT AGCATCTCAG TTTGCACCGC TGATGGAGGA TATTGAGGGC
AGGACAAATC TTCTTATCGA AAAGGCTATT TTGGCAAGTG GGACTTATAC ACTTGAGCAA
CCCGAGTTGC CACGCGAGCC AAGTATGGCA TCAGGTTATC AAGAACTGAG CCTGCCAAAC
TTAAGCCTGC CAAACTTAAG CCTGCCAAAC TTAAGCTCGA AAGCATTAAG CTGGAAAGAA
CTAAGCTCGA AAGAACTAAG CTGGAAAGAA TTAGAGTCTC AATGCAGTGC AACGACCTTT
TGCTTGGGTG AAACGCACAT TGAGGCTTGG TTACAATCTC ATACCGATAT CAAGGGCGCA
GCAGACAAGC AGCCTTGGTA TCAGTCCGAA CAGCTCGCTT TGTTAGACTG CTTAACGCCG
AATCGCGCCC ACAGCCTGTT ACTGCAATTG CTGCAACAGC TACGCGTGCA AGCGACTGGG
CCGTACCACA TCAGTATCAC TGAGCAATGG CAGGAATATC ACGGGCAGTT GTTAGCCTTT
TCCGCAGCGG ATATGGGCGA GGCATGGCAG AGCCGATTGG CGCAATTACT CAGCATACAA
ACACAGATCC ATGATTGGAC GGCGACCTTG GCTGATTGTT TAGTCGAACC GCAGTTTTGC
CATCGCGACT TAAATCCCCA TAATTTGCTG CTTAAAGATA ACCAGTTGTA TTGCATCGAC
TTTGAGTATG CAACCGCCTC CCATCCTTTG TGTGAACTGG CCGTTGTGCT CGCAACTCAC
CAATTAACGC CTGTGCAGCG ATATCTGTTA GTGCGGCAGT ATCTGGCAGG GCACCCCGGC
TTAACCTCGG ATGCCATCAA GGCGATACCC GCAGCAATCG AGATGTATTG GGTGTTTGCT
GTGTATTGGG CATTATTGAT GGCGGCGCAC ACCCGTGGTG AGCGGCAGCA GGAATACTTC
GACTGGTTCG ATCATTTCTG GCCACTTATC AGCCACACGT CTTAA
 
Protein sequence
MPPIVDQDKD TLLAVLAQAG LTDISQIQPL AHGLSNHNYH IETPTAHYVL RENADAADSF 
CSREQELFYW RHLAKAKLAP ELLWVSGDQR YYLSQFIFAQ SLPSLPLASQ FAPLMEDIEG
RTNLLIEKAI LASGTYTLEQ PELPREPSMA SGYQELSLPN LSLPNLSLPN LSSKALSWKE
LSSKELSWKE LESQCSATTF CLGETHIEAW LQSHTDIKGA ADKQPWYQSE QLALLDCLTP
NRAHSLLLQL LQQLRVQATG PYHISITEQW QEYHGQLLAF SAADMGEAWQ SRLAQLLSIQ
TQIHDWTATL ADCLVEPQFC HRDLNPHNLL LKDNQLYCID FEYATASHPL CELAVVLATH
QLTPVQRYLL VRQYLAGHPG LTSDAIKAIP AAIEMYWVFA VYWALLMAAH TRGERQQEYF
DWFDHFWPLI SHTS