Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Shewana3_2495 |
Symbol | |
ID | 4477546 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Shewanella sp. ANA-3 |
Kingdom | Bacteria |
Replicon accession | NC_008577 |
Strand | - |
Start bp | 2986087 |
End bp | 2986680 |
Gene Length | 594 bp |
Protein Length | 197 aa |
Translation table | 11 |
GC content | 50% |
IMG OID | 639727093 |
Product | DoxX family protein |
Protein accession | YP_870130 |
Protein GI | 117920938 |
COG category | [S] Function unknown |
COG ID | [COG2259] Predicted membrane protein |
TIGRFAM ID | |
|
|
Plasmid Coverage information |
Num covering plasmid clones | 17 |
Plasmid unclonability p-value | 0.640487 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
| |
Fosmid Coverage information |
Num covering fosmid clones | 12 |
Fosmid unclonability p-value | 0.00764206 |
Fosmid Hitchhiker | Yes |
Fosmid clonability | hitchhiker |
| |
Sequence |
Gene sequence | ATGTCCCTTG TTAACCTTTA TCAAAAATTC CTCAATGCGA GCCGTTATGG TGAGGGGCTT GCCCCCTTAG CCCTTAGGCT CTATCTCGCG CCAGTGCTAA TGCAGGCTGG CTATAATAAA CTCGCACACT TTGAAGACAC TGTGGCTTGG TTTGCTAATC CCGATTGGGG ATTGGGTTTA CCTATGCCGA CGTTAATGGC TGCCTTGGCA GCGGGCACTG AGTTTTTTGG CGCGTTTTTG TTACTCGTTG GCTTAGCGAC GCGGCTGATT TCTATCCCTT TGATGATAAC CATGCTGGTG GCGGCGTTTA CTGTGCATTG GCCTAATGGT TGGCTGGCGA TTGCCGATGG CAGTTCATGG CTCGCCAATG AGCGGGTGCT TGAGGCGGGT GATAAGCTGG ATAAGGCCAA ATCCCTGTTG CAGGAATACG GCAATTACGA TTGGTTGACC AGCTCGGGTA ACTTGGTGGT GCTAAATAAT GGTATTGAGT TCGCAGCGAC CTACTTCATT ATGTTGCTGG CACTCTTTAG CCTAGGAGGC GGGCGTTATA TCAGTCTCGA TTACTTTATC GCGAAGCGTT ATAACGTAAA GTAA
|
Protein sequence | MSLVNLYQKF LNASRYGEGL APLALRLYLA PVLMQAGYNK LAHFEDTVAW FANPDWGLGL PMPTLMAALA AGTEFFGAFL LLVGLATRLI SIPLMITMLV AAFTVHWPNG WLAIADGSSW LANERVLEAG DKLDKAKSLL QEYGNYDWLT SSGNLVVLNN GIEFAATYFI MLLALFSLGG GRYISLDYFI AKRYNVK
|
| |