Gene Shewana3_2486 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagShewana3_2486 
Symbol 
ID4476667 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameShewanella sp. ANA-3 
KingdomBacteria 
Replicon accessionNC_008577 
Strand
Start bp2972641 
End bp2973906 
Gene Length1266 bp 
Protein Length421 aa 
Translation table11 
GC content49% 
IMG OID639727084 
Producthypothetical protein 
Protein accessionYP_870121 
Protein GI117920929 
COG category[S] Function unknown 
COG ID[COG3146] Uncharacterized protein conserved in bacteria 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones15 
Plasmid unclonability p-value0.954327 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones22 
Fosmid unclonability p-value0.812724 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGAGACAAC TGATATTGGC CTTTGCCAGC GCGGCGCAGA GTATTGACGC TAGCAGCTGG 
GACCGATTGA TGGGGACGGA CAATCCCTTC TGCCAGCATG CCTATATACT CAGCTTAGAG
CTGAGTTTGT CGGCCTGTGC CGCGACGGGT TGGCGGCCAC ATCATTTAGG TGTGTTCGAC
GCCACTGGCA GTGAATTTAC ACAAGAATTA GCGCCAGATG CCGTTATTGT TAGCCAAAAA
GATGCCGCAG ATTTTATGGA TTTACCCCTG CTGGCATTGA TGCCGCTTTA TCAAAAATTC
CACTCCTACG GTGAATATGT GTTTGATTGG GCATGGGCGC AGGCCTATGA GCGCCATGGT
TTTGAATATT ATCCTAAATT GTTAAATGCC ATTCCGTTTA CACCGGTGCA GGGGCGGCGG
TTGGGGTTAT CGTCTACGCT TTTGGCAGAG GAAGCGCAGC AGCTAAGCCG CGCCGTATTT
ACGTGCTTAA ATGAGCAATT AGTTAACGTG GATGTGCCAA TGTCCTCTTG GCATTGCTTA
TTTGTCTCGC CTTCGCAGCA AGCGCTATTT GTTGAGGCAT CCAATCCCAC TTCCCTTAAA
CGTTTAAGCA CCCAGTTCCA TTGGCATAAT CGTGGTTATG CAGATTTTGA AGCCTTTTTA
GCGGCACTCA CCTCCCGTAA GCGTAAAAAC ATCCTTAAGG AGCGTGCCCA GCTACAGCCC
TATGGCTTGC AATATGAGTT TGTCGCGGGA GCGGATATTA GCCGTGAGCA ATGGCAGCAT
TTTATTGAAT GTTATCAATT AACCTACCTT AAGCGCTCCG GCCATCGTGG CTATTTAACG
CCAACATTTT TTAACATGAT TGCCGAGCGG TTGGCTGAGC AAATTGTCTT GCTCGTGGTG
AGTGATGCGA AAGGGCAGAT GTTAGCGGGC GCGCTGTATT TTACGGGCCG CAACGAGCAA
GGGCAGACAT GTCTATTTGG TCGTTATTGG GGCAGCATTG TCGAGCTTGA GGGATTACAC
TTTGAGGCCT GTTATTATCA GGGCATTGAA TACTGTATCG TCCATGGGAT TGATATCTTT
GATGCAGGCG CTCAGGGCGA ACATAAAGTG CTGCGCGGCT TCGAGCCTGT GGCGCTTTAT
TCCTACCACA ATATTGCTCA TCCCGACTTT AAGCGAGCCA TAGCGCATTT TACCGAGGAG
GAAGCTGCAC AAATGGAAGT GTATATGCAG CAGATGCGCG AGGTGTTGCC CTATAAAAAG
GGCTAA
 
Protein sequence
MRQLILAFAS AAQSIDASSW DRLMGTDNPF CQHAYILSLE LSLSACAATG WRPHHLGVFD 
ATGSEFTQEL APDAVIVSQK DAADFMDLPL LALMPLYQKF HSYGEYVFDW AWAQAYERHG
FEYYPKLLNA IPFTPVQGRR LGLSSTLLAE EAQQLSRAVF TCLNEQLVNV DVPMSSWHCL
FVSPSQQALF VEASNPTSLK RLSTQFHWHN RGYADFEAFL AALTSRKRKN ILKERAQLQP
YGLQYEFVAG ADISREQWQH FIECYQLTYL KRSGHRGYLT PTFFNMIAER LAEQIVLLVV
SDAKGQMLAG ALYFTGRNEQ GQTCLFGRYW GSIVELEGLH FEACYYQGIE YCIVHGIDIF
DAGAQGEHKV LRGFEPVALY SYHNIAHPDF KRAIAHFTEE EAAQMEVYMQ QMREVLPYKK
G