| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Shewana3_2466 |
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| Symbol | |
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| ID | 4476647 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Shewanella sp. ANA-3 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_008577 |
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| Strand | + |
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| Start bp | 2954217 |
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| End bp | 2954912 |
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| Gene Length | 696 bp |
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| Protein Length | 231 aa |
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| Translation table | 11 |
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| GC content | 48% |
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| IMG OID | 639727064 |
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| Product | anti-ECFsigma factor, ChrR |
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| Protein accession | YP_870101 |
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| Protein GI | 117920909 |
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| COG category | [T] Signal transduction mechanisms |
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| COG ID | [COG3806] Anti-sigma factor |
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| TIGRFAM ID | [TIGR02451] anti-sigma factor, putative, ChrR family |
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Plasmid Coverage information |
| Num covering plasmid clones | 19 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 25 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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| |
Sequence |
| Gene sequence | ATGATTAAAC ATCATCCCCA TACCGATTTA CTGCTAGCCC ATGCACAAGG TGAGCTGCCG
TTGTCTATGT CGATTGCCAT TGCGGCCCAT TGTGCCCTTT GCCATGAGTG TCAATCGCAA
GTCAGCCGCT TTACTGAACA AGCGGCAGAA CTCGCCTTTT TAGCGCCGAG CCAAACCACT
GAACCAGCTT TTATCAGCGA AACCGATACC GCACAAGATG ACGCCTGGCA GCAAATGTTG
TCGCATATTA TGGACTTGCC AGAAGCAACG CCAACTGAAA ACGACTATCT CGCCAAAGCG
ACGGTTTACC TAAATCATAA GCATGTGCGC TATGAGATCC CTACAGTCTT TCGTCAACAT
ATCGCTCATC CGTGGCAGCA GATTGGTAAA GTCAGCCGAA TGCGTTTCGA TGTGAATGAA
AGCCACACCC GCGCCAGCCT ATTGCATATC GACGCCTTAG GTGAGATCCC GCAGCATACC
CATAAGGGAT ACGAACTAAC CCTGTTATTG GCAGGAGAAT TTTCGGATCT CAACGGGCAG
TATGTTCCCG GCGATTTCAT CATCTTAGAT GGCAACACGC ATCATTCACC CAAAACCCAG
TCTGGGTGCC TCTGCTACAC AGTATTAGAT GCACCGTTAT ATTTTACCAA AGGGCTCAGT
AAATTATTGA ATCCCATTGG TGAGCTGATT TATTAA
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| Protein sequence | MIKHHPHTDL LLAHAQGELP LSMSIAIAAH CALCHECQSQ VSRFTEQAAE LAFLAPSQTT
EPAFISETDT AQDDAWQQML SHIMDLPEAT PTENDYLAKA TVYLNHKHVR YEIPTVFRQH
IAHPWQQIGK VSRMRFDVNE SHTRASLLHI DALGEIPQHT HKGYELTLLL AGEFSDLNGQ
YVPGDFIILD GNTHHSPKTQ SGCLCYTVLD APLYFTKGLS KLLNPIGELI Y
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