Gene Shewana3_2379 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagShewana3_2379 
Symbol 
ID4479614 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameShewanella sp. ANA-3 
KingdomBacteria 
Replicon accessionNC_008577 
Strand
Start bp2859881 
End bp2860339 
Gene Length459 bp 
Protein Length152 aa 
Translation table11 
GC content48% 
IMG OID639726976 
Producthypothetical protein 
Protein accessionYP_870014 
Protein GI117920822 
COG category[S] Function unknown 
COG ID[COG2983] Uncharacterized conserved protein 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones
Plasmid unclonability p-value0.00123307 
Plasmid hitchhikingYes 
Plasmid clonabilityhitchhiker 
 

Fosmid Coverage information

Num covering fosmid clones18 
Fosmid unclonability p-value0.207331 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGAAGATAA GCGTAAACAT GGCATTTTGG CAGAATAAAG CGTTAACCGA GTTGACGTCG 
CAGGAGTGGG AGTCCCTCTG CGATGGTTGT GGTAAGTGTT GTTTAAACAA GTTGATCGAT
GATGAAACCG AAGAGCTGTA TTACACCAAT GCGGCTTGCC TACTGCTCGA TCATCAAAGT
GCCAGCTGTA AGCATTATAG TGACCGTTTC AGCCATGTTC CCCAATGTAC TGTGATCACT
CCGCAAAACG TCCATGAACT GACGTGGTTA CCCGATAGCT GCGCCTATCG TCGTTTAGCC
GCTGGTCGAG ACTTGCCAAG CTGGCATCTA TTACTCACGG GCTCTAAAGA GGCCATGCAC
CTTGCGGGTA TGTCGATTCA AGGCAAGGTG GTGGATGAGC GCAGGGTGAA AGATATTGAA
GATCATATCG TGCTGTGGCC GCTGAAAGAT CTAGATTAA
 
Protein sequence
MKISVNMAFW QNKALTELTS QEWESLCDGC GKCCLNKLID DETEELYYTN AACLLLDHQS 
ASCKHYSDRF SHVPQCTVIT PQNVHELTWL PDSCAYRRLA AGRDLPSWHL LLTGSKEAMH
LAGMSIQGKV VDERRVKDIE DHIVLWPLKD LD