Gene Shewana3_2243 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagShewana3_2243 
Symbol 
ID4477668 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameShewanella sp. ANA-3 
KingdomBacteria 
Replicon accessionNC_008577 
Strand
Start bp2696921 
End bp2698006 
Gene Length1086 bp 
Protein Length361 aa 
Translation table11 
GC content51% 
IMG OID639726838 
Producthypothetical protein 
Protein accessionYP_869878 
Protein GI117920686 
COG category[R] General function prediction only 
COG ID[COG1721] Uncharacterized conserved protein (some members contain a von Willebrand factor type A (vWA) domain) 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones15 
Plasmid unclonability p-value0.760307 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones20 
Fosmid unclonability p-value0.435241 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGAAACGAG TATTGACGGC TTTCTGGCAA CGCTGGTTGG CAAGACGCAT GCCGCCCAGT 
TCTGAGTTTG TCCTCAGCCA TCGCAGCATC TTTATTCTGC CCAGTGGCTT TGGGTTAGTC
TGGCTTGCTC TGGTACTGCT GCTGTATCTG TTTGGCACTA ACTATCAAAA TAACCTAGTG
ATTGGGCTGA GCATTTTGCT ACTCAGCCTA TTTAATACCT GCATCCTCTA CAGCTATAAA
AATCTCGCAG GTTTGCGCCT TCGCGCGCTC ACAGCACCTG AGGTATATGC GGGCGAAACC
ATCACCTTTC CAGTCCTGCT CACCTCAAGT CACAGCAGCC ACAATATCAG CTTAAATTAT
CCGAATAATT TAGCTTACTT ACTCAAACAG GTCGGCGCCG ATGAGGTGCA AGCCTTGGTC
TCGTTTGCCC ATGATCGCCG CGGCTTGGTA TCGCCTGGGC GACTTAAGAT TGAATCCTTT
TATCCCTTAG GGCTTTGCCG CGCTTGGTCC CATATTGATC TCGATAATGC GCACATCGTC
TACGCTCACC CGATTGAAAG CCCTTTGCAG CTAAAAGCAG CCACCGAATC CGGTGAAGAC
GAACGGTTAG AAAGAGCCGG AAAATACATT GCCGGCATCG ATGAATACAA AGGGCTTAAG
CCCCATGTGC TCGGAGAATC CCTCAAACAA GTGGCATGGA AACAATGGGC TCAAGGGCGT
GGCATGCTAA CCAAGGAGTT CGAGCAGCCT CAGGGCGATC CCGTGTGGCT AACCTTAGTC
CCCGATCCCG CACAGCTTGA ACAGCAATTA GGTCAGCTCA GTTGGCAAGT CAACCATTTA
AGTCAGCAGG AGCAATATTT TGGTCTGTGG CTACAACGTG TCGGGGCGGA AGATCTGATC
CTCACACCCG ATACGGGCAA TGCCCATCGC ATCGCCTGCC AAAGGGCGCT CGCACTCTAC
GGGCAAGATA TCAGTACGCT GGATAAAATC GATAAATTGG CGAATAACCA AGGCGTTAGC
CATAAGCATC CGCTTCCTCC CCATGGACAA GGCGTTCATG CGGCAAAAAT GGAGCCGCGG
CGATGA
 
Protein sequence
MKRVLTAFWQ RWLARRMPPS SEFVLSHRSI FILPSGFGLV WLALVLLLYL FGTNYQNNLV 
IGLSILLLSL FNTCILYSYK NLAGLRLRAL TAPEVYAGET ITFPVLLTSS HSSHNISLNY
PNNLAYLLKQ VGADEVQALV SFAHDRRGLV SPGRLKIESF YPLGLCRAWS HIDLDNAHIV
YAHPIESPLQ LKAATESGED ERLERAGKYI AGIDEYKGLK PHVLGESLKQ VAWKQWAQGR
GMLTKEFEQP QGDPVWLTLV PDPAQLEQQL GQLSWQVNHL SQQEQYFGLW LQRVGAEDLI
LTPDTGNAHR IACQRALALY GQDISTLDKI DKLANNQGVS HKHPLPPHGQ GVHAAKMEPR
R