Gene Shewana3_2221 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagShewana3_2221 
Symbol 
ID4478617 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameShewanella sp. ANA-3 
KingdomBacteria 
Replicon accessionNC_008577 
Strand
Start bp2668961 
End bp2669254 
Gene Length294 bp 
Protein Length97 aa 
Translation table11 
GC content43% 
IMG OID639726816 
Productanti-sigma-factor antagonist 
Protein accessionYP_869856 
Protein GI117920664 
COG category[T] Signal transduction mechanisms 
COG ID[COG1366] Anti-anti-sigma regulatory factor (antagonist of anti-sigma factor) 
TIGRFAM ID[TIGR00377] anti-anti-sigma factor 


Plasmid Coverage information

Num covering plasmid clones23 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones27 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGGCTAATA TTTTCTACAT CTCTTTGCCG GAACGTTTTG ATTTTTATCA CCATAAAAAA 
TTCACCAACG ATTATCAAAA GGCCTTTCTC GAAGAGGACA TTAAGCACTT AGTGCTGGAT
TTTAGCCGCG TGCTTTACAT TGATAGCTCG GCCCTTGGAA TGATGGTGTT GCTGCATCGA
AAAGCGTTGG AGCGACAGAT CAGCACGGCG ATTCGAGGTT TGCACGGTCA AGCGGAAGAA
ATTATCAACA TAGCTAATAT GGGTCGTTTG TATCTTGTCG AACGGGATGT ATAA
 
Protein sequence
MANIFYISLP ERFDFYHHKK FTNDYQKAFL EEDIKHLVLD FSRVLYIDSS ALGMMVLLHR 
KALERQISTA IRGLHGQAEE IINIANMGRL YLVERDV