| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Shewana3_2165 |
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| Symbol | |
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| ID | 4478364 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Shewanella sp. ANA-3 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_008577 |
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| Strand | + |
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| Start bp | 2593702 |
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| End bp | 2594307 |
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| Gene Length | 606 bp |
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| Protein Length | 201 aa |
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| Translation table | 11 |
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| GC content | 50% |
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| IMG OID | 639726756 |
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| Product | rhomboid family protein |
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| Protein accession | YP_869801 |
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| Protein GI | 117920609 |
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| COG category | [R] General function prediction only |
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| COG ID | [COG0705] Uncharacterized membrane protein (homolog of Drosophila rhomboid) |
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| TIGRFAM ID | |
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| 
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Plasmid Coverage information |
| Num covering plasmid clones | 10 |
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| Plasmid unclonability p-value | 0.0257176 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 25 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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| |
Sequence |
| Gene sequence | GTGAGACTGG TAACGTTAAA AAAACTCGGC CCCTATTGGC TGGCGCTTAT CGTCAGTCTG
CTCTGCGCAC TCTTGTATGT TGCGGGACTT TTTACCCCGA GCATAGATAA CCTGCTCGCC
TATCGCCGCA GCGCCATCAG TGATGGCCAG TGGTGGCGTC TGATCACAGG CAATCTGCTG
CATACCAATC ATTGGCACCT GCTGATGAAC CTCGCAGGAT TATGGGTAGT GTTGTTTTTG
CACCACTTTC ATTATCGACT TAACGGATTA ACCGCGCTGT TTATTCTGCT TTGTCTATTT
GAAGGCATTG GCCTGTATCT GGGTTATCCG CAGCTATTAG GTTATGTGGG GCTGAGTGGC
ATGTTACACG GCCTATTTAC CTTTGGTGCA GTGCAGGATA TACGCCGCAA AATGCGCTCG
GGTTATTTGC TGCTGCTCGG CGTGATAGTC AAAGTCGGCC ATGAACAGTT CTATGGTGCC
AGTGATGATG TGACCGCAAT GATTGGTGCA CGCGTGGCCA CTGAGGCGCA TTTAGTCGGC
CTGATCTGTG GCTTAGTCTG CGCGCTTATG GTGTTTGTGT ACCAACGAAG CACACTAGCA
AAGTAA
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| Protein sequence | MRLVTLKKLG PYWLALIVSL LCALLYVAGL FTPSIDNLLA YRRSAISDGQ WWRLITGNLL
HTNHWHLLMN LAGLWVVLFL HHFHYRLNGL TALFILLCLF EGIGLYLGYP QLLGYVGLSG
MLHGLFTFGA VQDIRRKMRS GYLLLLGVIV KVGHEQFYGA SDDVTAMIGA RVATEAHLVG
LICGLVCALM VFVYQRSTLA K
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