Gene Shewana3_2151 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagShewana3_2151 
Symbol 
ID4478347 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameShewanella sp. ANA-3 
KingdomBacteria 
Replicon accessionNC_008577 
Strand
Start bp2576498 
End bp2577970 
Gene Length1473 bp 
Protein Length490 aa 
Translation table11 
GC content49% 
IMG OID639726739 
Productglucose-6-phosphate 1-dehydrogenase 
Protein accessionYP_869787 
Protein GI117920595 
COG category[G] Carbohydrate transport and metabolism 
COG ID[COG0364] Glucose-6-phosphate 1-dehydrogenase 
TIGRFAM ID[TIGR00871] glucose-6-phosphate 1-dehydrogenase 


Plasmid Coverage information

Num covering plasmid clones
Plasmid unclonability p-value0.013826 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones17 
Fosmid unclonability p-value0.219561 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGGGCAAAA CAACATCAGG CGCCAAAGCT TGTGACTTCG TACTCTTTGG TACTAAAGGC 
GACTTGGCAC GACGCAAGTT GTTACCTTCT TTATACCAGC TAGATAAAGC TGAACTTCTG
GATAAAAACA CCAAAGTCAT TGGGGTTGCC AAAGATGAGT TCAGTCAGGA TGAATTTAGA
GAACTCGTCA TCCTTGCGTT AAAAACCTTC GTAAAAGAAG CCCTCTGCGA AGAGACTGTC
CAACGCTTCT TGTCCCGCTG CCATTATGTC GGCACGAATT TCACCGAATC TGCAGGCTAC
AGCGCCTTCC ATGAATTGCT CAAACCAGAA GAGCGCGTCA TGGTCAGTTA TTTTGCCACC
CCTCCTGCGA TTTTTGGCGA TATCTGCCGC TGTTTACACG AACAAAATCT TATCCATAGC
GATTCTCGCG TGGTACTCGA AAAGCCCATT GGCTCTGACC TCGCTTCTTC CCGTGTGATT
AACGATCAAG TTTCTGCCTA CTTCAAAGAA AACCAAGTTT ATCGTATCGA CCATTACTTA
GGTAAAGAGA CAGTCCAAAA CCTGATTGCG CTGCGTTTCG CTAACTCGTT ATTCGCGTCT
AAGTGGGACA ACCGGACCAT TGACCATGTC CAGATCACCG TTGCTGAAGA AGTGGGTATC
GAAGGCCGTT GGGGTTACTT CGATAAAGCC GGTCAGATGC GCGATATGAT CCAAAACCAC
TTACTGCAAG TGTTGACACT GGTTGCCATG GATCCACCAG TTAACTTAGA TGCTGACAGT
ATTCGCGATG AAAAAGTGAA AGTACTGAAG TCGCTGCGCC CAATCAATGC CGACAATGTC
TATGAGAACA CTGTCCGTGG TCAGTACAGT GCCGGCTTCC TAAAAGGCAG TCCTGTTCCT
GGCTATTTAG AGGAAGAGGG CGCTAACCTT CAGTCCCATA CTGAAACCTT TGTGGCGCTG
CGTGTCGATA TCGACAACTG GCGTTGGGCT GGCGTGCCAT TTTATCTGCG TAGCGGTAAA
CGCATGCCGT TCAAGAGCTC TGAAATTGTG GTGTATTTTA AAAACCCACC CCACAACTTG
TATCGCTCAA GCTACCGTAA CTTGCCACCT AACAAGTTAA CCATCCGTCT GCAACCACAT
GAAGGGGTTG AGATCCAGAT GATGAACAAG GTGCCGGGGC TAGAGCAGAA ACAACGTTTA
CAAACCACCA AACTCGACTT GAGTTTCTCG GATACCTTTA AAAACGAGCG TATCGCCGAT
GCTTACGAGC GTCTGTTGCT CGAAGCCATG CTCGGTAACC AAGCCCTGTT CGTTCGCCGT
GACGAAGTAG AGCAGGCTTG GACTTGGGTG GATGGCATCA TCCAATCATG GGAACAAAGT
AACGAGAAAC CGAAACCTTA TCCTGCGGGC ACTTGGGGAC CTGTTGCGTC GGTCGCGCTG
ATCACCAAAG ACGGCCGTTC GTGGGATGAA TAG
 
Protein sequence
MGKTTSGAKA CDFVLFGTKG DLARRKLLPS LYQLDKAELL DKNTKVIGVA KDEFSQDEFR 
ELVILALKTF VKEALCEETV QRFLSRCHYV GTNFTESAGY SAFHELLKPE ERVMVSYFAT
PPAIFGDICR CLHEQNLIHS DSRVVLEKPI GSDLASSRVI NDQVSAYFKE NQVYRIDHYL
GKETVQNLIA LRFANSLFAS KWDNRTIDHV QITVAEEVGI EGRWGYFDKA GQMRDMIQNH
LLQVLTLVAM DPPVNLDADS IRDEKVKVLK SLRPINADNV YENTVRGQYS AGFLKGSPVP
GYLEEEGANL QSHTETFVAL RVDIDNWRWA GVPFYLRSGK RMPFKSSEIV VYFKNPPHNL
YRSSYRNLPP NKLTIRLQPH EGVEIQMMNK VPGLEQKQRL QTTKLDLSFS DTFKNERIAD
AYERLLLEAM LGNQALFVRR DEVEQAWTWV DGIIQSWEQS NEKPKPYPAG TWGPVASVAL
ITKDGRSWDE