Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Shewana3_2149 |
Symbol | |
ID | 4478345 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Shewanella sp. ANA-3 |
Kingdom | Bacteria |
Replicon accession | NC_008577 |
Strand | - |
Start bp | 2573951 |
End bp | 2575777 |
Gene Length | 1827 bp |
Protein Length | 608 aa |
Translation table | 11 |
GC content | 51% |
IMG OID | 639726737 |
Product | phosphogluconate dehydratase |
Protein accession | YP_869785 |
Protein GI | 117920593 |
COG category | [E] Amino acid transport and metabolism [G] Carbohydrate transport and metabolism |
COG ID | [COG0129] Dihydroxyacid dehydratase/phosphogluconate dehydratase |
TIGRFAM ID | [TIGR01196] 6-phosphogluconate dehydratase |
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Plasmid Coverage information |
Num covering plasmid clones | 5 |
Plasmid unclonability p-value | 0.00662337 |
Plasmid hitchhiking | Yes |
Plasmid clonability | hitchhiker |
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Fosmid Coverage information |
Num covering fosmid clones | 16 |
Fosmid unclonability p-value | 0.165329 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGCACTCAG TCGTTCAATC TGTTACCGAC AGAATTATTG CCCGTAGCAA AGCATCTCGT GAAGCGTATT TAGCCGCGTT AAATGATGCT CGTAACCATG GCGTACACCG TAGCTCCTTA AGCTGCGGTA ACTTAGCCCA CGGTTTTGCT GCTTGTAGTC CAGATGACAA AAATTCATTG CGTCAACTGA CCAAAGCTAA CATCGGGATT ATTACCGCAT TCAACGATAT GTTGTCTGCA CACCAACCCT ATGAAACCTA TCCTGAATTG CTGAAAAAAG CTTGTCAGGA AGTGGGCAGT GTTGCACAGG TCGCAGGTGG TGTACCTGCA ATGTGTGACG GTGTGACTCA AGGTCAACCC GGGATGGAAC TGAGCTTACT GAGTCGTGAA GTGATTGCCA TGGCGACGGC GGTGGGCTTA TCCCACAACA TGTTTGATGG CGCCTTATTA CTGGGTATCT GCGACAAAAT CGTGCCGGGC TTATTGATTG GCGCCTTAAG TTTTGGCCAT TTACCTATGC TGTTTGTGCC TGCAGGCCCA ATGAAGTCGG GGATCCCAAA CAAGGAAAAA GCCCGTATTC GCCAGCAATT TGCCCAAGGT AAAGTCGATA GAGCGCAGCT GCTTGAAGCC GAAGCGCAGT CTTATCACAG CGCTGGCACT TGTACCTTCT ACGGTACGGC TAACTCGAAC CAGCTGATGC TCGAAGTCAT GGGGCTGCAA TTGCCGGGTT CATCCTTTGT GAATCCTGAC GACCCACTGC GTGAAGCGCT GAATAAAATG GCGGCCAAGC AGGTGTGCCG CTTAACAGAG CTTGGCACTC AATACAGCCC AATCGGTGAA GTGGTTAACG AGAAATCCGT GGTGAACGGC ATAGTGGCGC TACTGGCAAC GGGTGGTTCA ACTAACTTAA CCATGCACAT TGTGGCGGCG GCGCGTGCGG CTGGCATTAT CGTGAACTGG GATGATTTTT CTGAATTATC TGACGCGGTT CCTTTGCTGG CCCGTGTTTA TCCAAACGGT CATGCGGACA TTAACCACTT CCACGCCGCG GGCGGTATGG CTTTCCTTAT CAAGGAATTA CTCGACGCGG GCCTCCTACA TGAGGATGTC AACACAGTTG CCGGTTTTGG TCTACGTCGT TACACCCAAG AGCCAAAATT ACTCGATGGC GAGCTGCGCT GGGTCGATGG TCCAACCGTC AGCTTAGATA CTGAAGTATT AACGTCTGTC GCTACGCCTT TCCAAAACAA CGGTGGCTTA AAACTGCTTA AGGGCAACTT GGGCCGTGCG GTGATTAAAG TGTCAGCCGT GCAAGAAAAA CACCGTGTAG TTGAAGCGCC TGCCGTGGTG ATTGACGATC AAAACAAACT CGATGCGCTG TTTAAATCCG GCGCATTAGA CCGAGATTGT GTGGTGGTAG TTAAAGGCCA AGGGCCGAAA GCGAACGGTA TGCCTGAGCT GCACAAGTTA ACGCCACTGT TAGGCTCTCT GCAGGATAAA GGCTTTAAAG TGGCTCTGAT GACCGACGGT CGTATGTCGG GCGCATCGGG CAAAGTACCA GCCGCAATTC ACTTAACGCC AGAGGCTATC GATGGAGGGC TAATTGCCAA AGTGCAAGAT GGCGATCTGA TTCGTGTCGA CGCACTGACC GGTGAGCTGA GCTTATTGGT CTCCGATGCC GAACTTGCCG CGAGAACCGC CGCTGAAATC GATTTACGCC ACTCACGCTA TGGAATGGGC CGTGAGTTGT TTGGGGCACT GCGTTCAAAT TTAAGCAGTC CAGAAACTGG TGCGCGCAGT ACCAGCGCCA TTGACGAACT TTATTAA
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Protein sequence | MHSVVQSVTD RIIARSKASR EAYLAALNDA RNHGVHRSSL SCGNLAHGFA ACSPDDKNSL RQLTKANIGI ITAFNDMLSA HQPYETYPEL LKKACQEVGS VAQVAGGVPA MCDGVTQGQP GMELSLLSRE VIAMATAVGL SHNMFDGALL LGICDKIVPG LLIGALSFGH LPMLFVPAGP MKSGIPNKEK ARIRQQFAQG KVDRAQLLEA EAQSYHSAGT CTFYGTANSN QLMLEVMGLQ LPGSSFVNPD DPLREALNKM AAKQVCRLTE LGTQYSPIGE VVNEKSVVNG IVALLATGGS TNLTMHIVAA ARAAGIIVNW DDFSELSDAV PLLARVYPNG HADINHFHAA GGMAFLIKEL LDAGLLHEDV NTVAGFGLRR YTQEPKLLDG ELRWVDGPTV SLDTEVLTSV ATPFQNNGGL KLLKGNLGRA VIKVSAVQEK HRVVEAPAVV IDDQNKLDAL FKSGALDRDC VVVVKGQGPK ANGMPELHKL TPLLGSLQDK GFKVALMTDG RMSGASGKVP AAIHLTPEAI DGGLIAKVQD GDLIRVDALT GELSLLVSDA ELAARTAAEI DLRHSRYGMG RELFGALRSN LSSPETGARS TSAIDELY
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