| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Shewana3_2122 |
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| Symbol | |
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| ID | 4478674 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Shewanella sp. ANA-3 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_008577 |
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| Strand | - |
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| Start bp | 2546690 |
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| End bp | 2548123 |
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| Gene Length | 1434 bp |
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| Protein Length | 477 aa |
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| Translation table | 11 |
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| GC content | 47% |
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| IMG OID | 639726710 |
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| Product | glyceraldehyde-3-phosphate dehydrogenase |
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| Protein accession | YP_869758 |
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| Protein GI | 117920566 |
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| COG category | [G] Carbohydrate transport and metabolism |
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| COG ID | [COG0057] Glyceraldehyde-3-phosphate dehydrogenase/erythrose-4-phosphate dehydrogenase |
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| TIGRFAM ID | [TIGR01534] glyceraldehyde-3-phosphate dehydrogenase, type I |
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Plasmid Coverage information |
| Num covering plasmid clones | 2 |
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| Plasmid unclonability p-value | 0.0000226974 |
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| Plasmid hitchhiking | Yes |
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| Plasmid clonability | hitchhiker |
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Fosmid Coverage information |
| Num covering fosmid clones | 13 |
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| Fosmid unclonability p-value | 0.0342325 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGAGCGCTG ATAAACACCT ACAAAGTTGG CAAGAACGTT TTGAAATGGC AGAGGCAATG
CAACCTTTGC TGGGCAAGTT GTACCGTAAC CAAGGCGTCG AAGTTGTGGT TTATGGTAAG
CCATTACTCA ATGCTTCTAC TATTGAGATT ATTAAAGCGC ACCGTTTAGT TCGTCGTCAT
GTCGGCGAGA AATTACGTTT ACGCGAGAGT TTCCCGTTTG TTCAAGCCTT AAGCAGACTC
GCAGTTAAAC AATGTAAAGT GGATATTGGT AAGCTTGCCG TTAAATACTG GGCTGAACAT
ACCGATACCA ACGAAATTGA AAGCTATATG GCACGTGAAT TAGCGGCAGC GATTGATCAT
GCTGATGATA TCGCCCCGCG TGATGTAGTG TTGTATGGTT TTGGTCGTAT TGGCCGCTTA
TTAGCGCGCT TACTGATCGA ACGTACTGGC CGCAGCAACA AGTTAAGACT GCGCGCTATC
GTGTTACGTG GTGGTAAGAA GGGCGATTTA GAAAAACGCG CAAGCTTACT GCGTCGTGAC
TCTGTTCATG GTCCATTTAA CGGTTCAGTT GAAGTGGATG AAGAGAACAA CGCTATCATC
GCTAACGGCA CCTATATTCA AGTTATTTAC GCAAACTCGC CAGATGAAGT GGATTACACC
AAATACGGTA TTACAGATGC CTTAGTGGTA GACAACACGG GTATTTGGAA AGATGAAGCA
GGCTTAGGCT TACACTTGAA GAGTCCAGGT GCGAGCAAAG TGTTACTGAC TGCACCTGCA
AAAGGCGCCA TCAAGAACAT CGTTTACGGC GTGAATGAAG GCGACATCAC TGCAGAAGAT
ATCATTGTGT CTGCGGCGAG CTGTACCACT AACGCCATCA CACCAGTACT GAAAGCGGTA
AACGACAAGT ACGGTATCGA GAATGGTCAC GTTGAGACTA TTCACTCATA CACGAACGAT
CAAAACCTGA TCGACAACTA CCACAGTGCT GACCGTCGTG GTCGCAGTGC ACCATTAAAC
ATGGTGATCA CTGAAACGGG CGCGGCTAAA GCCGTAGCTA AAGCTCTGCC AGTATTAGCG
GGTAAACTGA CGGGTAACGC GATTCGCGTG CCAACACCAA ACGTGTCTAT GGCGATCATC
AGCATGAACC TCAATGCTGA GACTAACAAA GATGAATTGA ACGAATACCT GAAAGACACT
GCGCTGCAAT CACCATTGCA GAACCAAATC GATTACACAG ACTCAACTGA AATCGTATCA
AGCGATTTAG TGGGTTCTCG CTATGCGGGC GTGGTTGATT CACAAGCGAC TATCGCCGAA
GGTAAACGTG CCATTCTGTA CGTATGGTAT GACAACGAAT TTGGTTACAG CTGCCAAGTC
GTCGGTGTGA TGCAGACGAT GTTAGGCCTG ACGACTCTGT CTCTGCCAGC ATAA
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| Protein sequence | MSADKHLQSW QERFEMAEAM QPLLGKLYRN QGVEVVVYGK PLLNASTIEI IKAHRLVRRH
VGEKLRLRES FPFVQALSRL AVKQCKVDIG KLAVKYWAEH TDTNEIESYM ARELAAAIDH
ADDIAPRDVV LYGFGRIGRL LARLLIERTG RSNKLRLRAI VLRGGKKGDL EKRASLLRRD
SVHGPFNGSV EVDEENNAII ANGTYIQVIY ANSPDEVDYT KYGITDALVV DNTGIWKDEA
GLGLHLKSPG ASKVLLTAPA KGAIKNIVYG VNEGDITAED IIVSAASCTT NAITPVLKAV
NDKYGIENGH VETIHSYTND QNLIDNYHSA DRRGRSAPLN MVITETGAAK AVAKALPVLA
GKLTGNAIRV PTPNVSMAII SMNLNAETNK DELNEYLKDT ALQSPLQNQI DYTDSTEIVS
SDLVGSRYAG VVDSQATIAE GKRAILYVWY DNEFGYSCQV VGVMQTMLGL TTLSLPA
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