| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Shewana3_2076 |
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| Symbol | |
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| ID | 4476322 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Shewanella sp. ANA-3 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_008577 |
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| Strand | + |
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| Start bp | 2484965 |
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| End bp | 2485927 |
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| Gene Length | 963 bp |
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| Protein Length | 320 aa |
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| Translation table | 11 |
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| GC content | 50% |
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| IMG OID | 639726661 |
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| Product | inner membrane ABC transporter permease protein YjfF |
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| Protein accession | YP_869712 |
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| Protein GI | 117920520 |
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| COG category | [G] Carbohydrate transport and metabolism |
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| COG ID | [COG1172] Ribose/xylose/arabinose/galactoside ABC-type transport systems, permease components |
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| TIGRFAM ID | |
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| 
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Plasmid Coverage information |
| Num covering plasmid clones | 17 |
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| Plasmid unclonability p-value | 0.915821 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 4 |
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| Fosmid unclonability p-value | 0.00000228556 |
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| Fosmid Hitchhiker | Yes |
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| Fosmid clonability | hitchhiker |
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Sequence |
| Gene sequence | ATGATAGCAA GACGTTTTAT CCCGCTGTGG ATCACCGCCT CATTGCTGCT GACCATGTTT
CTGGTTGGCA CCTTTCAGTT TGACGGTTTT GCCAGTGGCC GAGTAGTCAC CAACCTGTTG
CGTGACAATG CATTCCTATT GATCACCGCA TTAGGCATGA CCTTAGTGAT TATCTCTGGG
GGTATCGATC TTTCGGTTGG TGCCGTCATC GCCTTAAGTG GGGTCGTCAC CAGTTTATTG
ATCACCGAGT ACCAATGGCA TCCATTGTTG GCCTTTGTGG TTATCTTACC CCTCGGCACT
CTGTTTGGCG CACTCATGGG CACTATTATC CATGTGTATA AGTTGCAGCC ATTTATTGTG
ACGCTTGCGG GCATGTTCCT GGCGCGGGGC TTAGCGACGA CGCTCAGCGA AGAGTCGATT
GCCATTGACC ATCCATTTTA CGATGCGGTG GCCGAGATGA GCATTGCACT GCCGGGCAAT
GGCGCACTCG ATTTAAGCTC ACTGATCTTT ATCCTGTTCT TTGTGATTAT CGCCGTGGTC
ATGCATTACA CCCGTTTTGG CACGAATGTG TATGCCATTG GTGGCAATCA ACATTCCGCC
GAACTAATGG GGATTTCCAT CGCGAAAACC ACCATCAGTA TTTACGCCAT CAGTAGCTTC
CTAGCAACGC TGGCAGGTAT TGTCTTTACC TTTTACACCT TCTCTGGCTA TGCACTTGGC
GCCATTGGCG TCGAACTGGA TGCCATTGCG GCCGTGGTCA TTGGCGGCAC CCTGTTAACT
GGCGGCAGTG GCTTTGTGCT CGGCACTGTG CTTGGGGTGA TTTTGATGGG GGTGATCCAA
ACCTATATCA CCTTCGATGG CAGCTTAAGC AGTTGGTGGA CCAAGATAGT CATTGGCCTG
TTACTGTTCT TCTTCATCCT GTTACAGAAA CTCTTGAATG GACGCAAAAC TCAACATGGA
TAA
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| Protein sequence | MIARRFIPLW ITASLLLTMF LVGTFQFDGF ASGRVVTNLL RDNAFLLITA LGMTLVIISG
GIDLSVGAVI ALSGVVTSLL ITEYQWHPLL AFVVILPLGT LFGALMGTII HVYKLQPFIV
TLAGMFLARG LATTLSEESI AIDHPFYDAV AEMSIALPGN GALDLSSLIF ILFFVIIAVV
MHYTRFGTNV YAIGGNQHSA ELMGISIAKT TISIYAISSF LATLAGIVFT FYTFSGYALG
AIGVELDAIA AVVIGGTLLT GGSGFVLGTV LGVILMGVIQ TYITFDGSLS SWWTKIVIGL
LLFFFILLQK LLNGRKTQHG
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