Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Shewana3_2067 |
Symbol | |
ID | 4476313 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Shewanella sp. ANA-3 |
Kingdom | Bacteria |
Replicon accession | NC_008577 |
Strand | + |
Start bp | 2474686 |
End bp | 2475294 |
Gene Length | 609 bp |
Protein Length | 202 aa |
Translation table | 11 |
GC content | 52% |
IMG OID | 639726652 |
Product | HAD family hydrolase |
Protein accession | YP_869703 |
Protein GI | 117920511 |
COG category | [R] General function prediction only |
COG ID | [COG0637] Predicted phosphatase/phosphohexomutase |
TIGRFAM ID | [TIGR01509] haloacid dehalogenase superfamily, subfamily IA, variant 3 with third motif having DD or ED [TIGR02009] beta-phosphoglucomutase family hydrolase |
| ![](https://exploration.weizmann.ac.il/pandatox/images_new/ic_cp.jpg)
![](https://exploration.weizmann.ac.il/pandatox/images_new/ic_hh.jpg)
|
Plasmid Coverage information |
Num covering plasmid clones | 2 |
Plasmid unclonability p-value | 0.00000117425 |
Plasmid hitchhiking | Yes |
Plasmid clonability | hitchhiker |
| |
Fosmid Coverage information |
Num covering fosmid clones | 5 |
Fosmid unclonability p-value | 0.0000127527 |
Fosmid Hitchhiker | Yes |
Fosmid clonability | hitchhiker |
| |
Sequence |
Gene sequence | ATGTATACAG AATTTGACGG CATTATCTTC GATATGGATG GCACCTTAGT CGACAGCGGT CAGTTGCATG AGCAGGCATG GCGACAAACC TTGAATCACT TTGGGATCCC GGTAGAGCCT GCACTGATGC GCTCCTTAGC AGGGGTGCCG ACTATTGGTA CCTTAGAGAT CCTAATCGCC CATTTTGGCG TCACGCCTAC GGCCAGTTGC GAGGCCATGA ACGAGTATAA AGAAGCCCTA GTGCGCGACA CTATGCATTT ATATGTGAAA CCGACGGCAT TAGCCGAATT TGCCAAGCAG AATCAGGGCA AACGCCCAAT GGCGGTCGGC ACAGGTGCCT ACACAGAGGA AGCCATTCAA ATCTTAACCC TGTGTGGATT ACTGGAATTA GTCGATTATG TGGTGGGTGC CGATCAGGTC GCGTCACCTA AACCCGCGCC AGACACCTTT TTACGCTGCG CCGAACTGAT GGGCATAGCG CCCGAGCGCT GTATCGTATT TGAAGATGCA AAGGCGGGCA TCCAAGCCGC CGAAGCTGCG GGGATGTTTG TGGTCGATGT GCATGCCGAA TTACAGATTG AAAATGACTA TTTCCTAGGC ACTCGGTAG
|
Protein sequence | MYTEFDGIIF DMDGTLVDSG QLHEQAWRQT LNHFGIPVEP ALMRSLAGVP TIGTLEILIA HFGVTPTASC EAMNEYKEAL VRDTMHLYVK PTALAEFAKQ NQGKRPMAVG TGAYTEEAIQ ILTLCGLLEL VDYVVGADQV ASPKPAPDTF LRCAELMGIA PERCIVFEDA KAGIQAAEAA GMFVVDVHAE LQIENDYFLG TR
|
| |