Gene Shewana3_2067 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagShewana3_2067 
Symbol 
ID4476313 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameShewanella sp. ANA-3 
KingdomBacteria 
Replicon accessionNC_008577 
Strand
Start bp2474686 
End bp2475294 
Gene Length609 bp 
Protein Length202 aa 
Translation table11 
GC content52% 
IMG OID639726652 
ProductHAD family hydrolase 
Protein accessionYP_869703 
Protein GI117920511 
COG category[R] General function prediction only 
COG ID[COG0637] Predicted phosphatase/phosphohexomutase 
TIGRFAM ID[TIGR01509] haloacid dehalogenase superfamily, subfamily IA, variant 3 with third motif having DD or ED
[TIGR02009] beta-phosphoglucomutase family hydrolase 


Plasmid Coverage information

Num covering plasmid clones
Plasmid unclonability p-value0.00000117425 
Plasmid hitchhikingYes 
Plasmid clonabilityhitchhiker 
 

Fosmid Coverage information

Num covering fosmid clones
Fosmid unclonability p-value0.0000127527 
Fosmid HitchhikerYes 
Fosmid clonabilityhitchhiker 
 

Sequence

Gene sequence
ATGTATACAG AATTTGACGG CATTATCTTC GATATGGATG GCACCTTAGT CGACAGCGGT 
CAGTTGCATG AGCAGGCATG GCGACAAACC TTGAATCACT TTGGGATCCC GGTAGAGCCT
GCACTGATGC GCTCCTTAGC AGGGGTGCCG ACTATTGGTA CCTTAGAGAT CCTAATCGCC
CATTTTGGCG TCACGCCTAC GGCCAGTTGC GAGGCCATGA ACGAGTATAA AGAAGCCCTA
GTGCGCGACA CTATGCATTT ATATGTGAAA CCGACGGCAT TAGCCGAATT TGCCAAGCAG
AATCAGGGCA AACGCCCAAT GGCGGTCGGC ACAGGTGCCT ACACAGAGGA AGCCATTCAA
ATCTTAACCC TGTGTGGATT ACTGGAATTA GTCGATTATG TGGTGGGTGC CGATCAGGTC
GCGTCACCTA AACCCGCGCC AGACACCTTT TTACGCTGCG CCGAACTGAT GGGCATAGCG
CCCGAGCGCT GTATCGTATT TGAAGATGCA AAGGCGGGCA TCCAAGCCGC CGAAGCTGCG
GGGATGTTTG TGGTCGATGT GCATGCCGAA TTACAGATTG AAAATGACTA TTTCCTAGGC
ACTCGGTAG
 
Protein sequence
MYTEFDGIIF DMDGTLVDSG QLHEQAWRQT LNHFGIPVEP ALMRSLAGVP TIGTLEILIA 
HFGVTPTASC EAMNEYKEAL VRDTMHLYVK PTALAEFAKQ NQGKRPMAVG TGAYTEEAIQ
ILTLCGLLEL VDYVVGADQV ASPKPAPDTF LRCAELMGIA PERCIVFEDA KAGIQAAEAA
GMFVVDVHAE LQIENDYFLG TR