Gene Shewana3_2037 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagShewana3_2037 
Symbol 
ID4476402 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameShewanella sp. ANA-3 
KingdomBacteria 
Replicon accessionNC_008577 
Strand
Start bp2437310 
End bp2440852 
Gene Length3543 bp 
Protein Length1180 aa 
Translation table11 
GC content41% 
IMG OID639726620 
Producthypothetical protein 
Protein accessionYP_869674 
Protein GI117920482 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones12 
Fosmid unclonability p-value0.0214825 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGGCTGTGG TAGAACAACT TAAACTGTGG ACAGCATCGG TTCTTCAGAG TAGGCAACAC 
GTGCCTTTTG GTAGCCCTTT GTGGGCTTAC AAAATCACAG ACAGTGAGCT TGAAGATCTC
CAAACAGTTT TACAACGTTT GTTTTCAACG ACCAATACTA ACTTACTTTT CAATAAGCAT
CTGAGCGTCT TATCACGGCC ACTTGTTCTT TATATCGCAA CTTGGCTTCA GCGGAAAACT
AAATCCCGTC CTACTTGGGA ACCTGTTACG GATAGCATCT GCTTAGATTA CAACACCAGT
AGCCGCGCCC TTATACTCGA CTGTATTAGA GCAGGTCTAA AAGAATTCGG CATAAAAATA
CACCACACTC AGAATTATAG ATACCTTGAT ACTTTGTATT GCCATGGAGG TTTTCCTCGA
GCGGATTTAC TTGGCATCTC TCATTCACAC CTAATGGGGT ATTTTGAAGA TGTACTTAAT
AATTATGCAA CGTTCCTCCA CTCGCTCACA GTTGATGAAA TCGCTGAGGG CAAATTGTCC
AGCTTACCTG AAACCTTACA GCAGAAGTCT TTTTCTAAAC TAGCTTCATC GCTAATTAGT
TACCTTTTCG AACTTAGAGA TAGTTTTCAT CTTTATGAGA CGTCTGATCC TCTCGCATTT
TTGGACATGA AGAATCCAAA TTGGCGAAAT AACTTACCTT TTTTAGTTAT TGATGAAGAA
GCTAGCAGGT TGATAAACAC ACTGCTAAAG AAAACTAGCA AAGTAGTTAG ACGTTCACAG
AACCCAGTCA GACTAAAGCG TTATCTCCGA CAAAACGCCG ACGAATTCAA TTTGTTTAGT
GAGGTGCATG TAAACCATAC AATTCATCCC GAAGACCTAA ATAAGGTTCT TGGAGTAAAT
TCACTTCCAA ACTTTTTTGA ATTAATCACT ATTACCGGAG ACGGCCACAG ATCCAGAGCG
GCCAGTTTTA GTTATAAAAC TGGTGCTGCG CCAAGATGGA TAGTTTCAGA GATCGTGCGT
CCCATAGTTG GTCTGTTGGC TGCAGGCGAG CTCAAGTATC AGCTATATTC TGATGGAGAA
CTGATTGGGA GCAATACTTA TCGCCACGGC GAGTCGTTTG ACGATCGTGC TCCTTGGATT
TTTGACGCTG ACGAACAAAA ATTTAATTAT TTAGGCCAGG GTAGTTTTCG TGACAGATTA
GCATCAGTGC TTGTTGTGAG TGACTGCGAA CCAGCGAAAT GCAGTCCATC CTCTCAAGTT
AGACTATTGG GTAAAGTCAG CTTCTGTGAA CGTAACGTCT ACAAAATAAC CGGCCATGTA
AAAATACCAT CAACCTTTGG CCATTTTCAT ATTCGAACCG ATGCTAGCCA ACTGAATCTA
GACTGCGTAA ATGTCAAAGG GAAAAAGTTG GTAGATGTTA TATCCGATAA ACCGGTATAC
ATCGGTAAAC CAAATCTAGT AATTGATGAA TCAAAGCCTG GTGCATTCTT AAATAAAGAA
GAATATTTTT GGGTGAGCAC CAATGGTACG AGAATTCCCT ATTTTAGTAA TACGGTTACT
TCGGGAACAG GTGCTGTTGT TAGGGTCCTT GAAGGCGAAA TTGTTTGGGT GCATGAATGC
GTCTATCTTC ACGATGAGTT TTTGGCAGAA CTAATTCACA ATGGAAAAGG GGAATTTGAA
GTAAAATTCC GGGGTTTGGA AAATGCCCAT GTTGGTTTAG TTCCTGGTCA AAGTGCAATT
TTGACCGCTG AGCCCGAACT CATAGCGGGC TTTAAGTTTT GTGATATCAG ATTAACTGAT
CTTCTAGTTG ACAGTGTTGA ATTCAGTATC TCCTGGTCAG ATGCCCCTGA TAATACAATA
AGACTCAGAT TGCCCATTGC ACTTAATGCG GTATCTTTGC TGACAAAGAC GGGGGATGTT
TATAGAGAAT GTGACCTAGG ATGTCTGACA GCTGACGATC TCATGGACTG TACTTTCAAG
TTTCAACCAG ACACATTTGA AACTCGGGTT AAAGTTGATC TCCTCGCCGA TGACAAAGTT
GACATGTCAG TTTCTCAAGA AATGAATCTT TCCGCGTCTG GTACAAGTAA AACTCTTCCT
GCGAGAGCTG TTGCTAACTT AGTGCGTCGA CTTTTCCGTA ATGGTTCAAC TCCGGAACAT
GTTGTCAGGT TATCGTTCTT TGCTAAAAAC GAAATTCTGG AGAACCGCAT ACCTCTAGTG
TATAGATTTA AATATATACC CAAAATTCGC GGCCAATTCG TTTACTTACC TAAAACTCTT
CTATTGATAA AGCATCTTGA CCAATTGAAG TTAAAGTTGA CACCAATTTG GGATCTTAAC
CGGGACACTC CAGATTTAGA ATTTCTGGTT GAGGATGGAG ATTTTGTAAA AGCAAAGCTA
CCAGAGATTG ATGAATATGG CGGATGGTTA CTGTGGGGGC CCGGACAAAC AAACTTTAAA
CCGACATTGA TTGAGTTTGA CGTTCCGGTT GTACGCAAGA AAATAGATAA CTTAGGTGCG
TTCGGACAGG CTCTAAAGTC AGCACTTCAG TGTTCTCAAG GCATCACTGA TTTTAATGAA
CCTCTAAAAC AAGACTCGAT ACAGTATGCG GTTAAGTATC TAAAGCAAGA GGGTAACAAG
CGTACTATTA ATTTCTCATT ACTCGATCGT ATTCTAGAAA AAATGGAAAA CGATATAGAT
CATGAAGGTT GGTCATATTT AAATGATCTG ATAGACCTCG TAGAAGATAT CGAGCCTGCA
AATTTTCATG TACTCAAGCG ACTGTTATCG CGCCCTTCTT GCTTAACCTT AATGCTTCTT
AGAGACACCT CCAGATTCCA CAAGGTGTGG GAGTTGGCTG ATTATTTGCC GTTTCAGTGG
ATTCTCATAC CAATATCAGC GTGGATCAAA GCTATTGATA AAGTTAAACG GAAAAATGCT
TCATCACTGG AATTGATAAA AAAAACAGCT CCTAATATTT ATGCCGAAGT TGAGCGTGGT
CTATTTAGAG ATCTCACTGC AAAAGGCCTA TATTTTAATA CATTGGTCGA TATCGCTTTA
GTCAATTTTA CTCCAAGTAA AAAAATCTGG GCGGATACAA AAGACCCGAG GGGCAGTTCT
TCTATTGGAA ATAAATTCCT GATTGCCAAG AGCAAATTGT TTGAGCGTCA TCAACACAAG
TTGATGAGTA TTTCACAGTC AAAGAAAAGA GATCTTGAGT TAATCGAATG TTTGGATAGG
TGTTGGCCTG TTTCTTCGTT GCCAAGCGAT CTTCGTGGCT TTTTCAGGGC AATGGGGGCC
ATTGAACAAA GTGAAGTGGT AAAGCGAGCT TACAAGCTTA CGATTGAATT ACCCGTAAAG
GTGGCTTTTT ATAACTTGGA TGTATTCCTG CAACCTCTTC CTCCAAGGGA ATTCCACGCG
CTGAGTTTCT CTTTGAGTCA ACTGCAACAG TTCGACAGAG AATGGTTGCA GGAGGCTATG
TCATTAGCCA CAGGGGCGGC ATATTCAGCT TTTTGTAACT CAGAATTCAC AGTGGTCGGT
TAA
 
Protein sequence
MAVVEQLKLW TASVLQSRQH VPFGSPLWAY KITDSELEDL QTVLQRLFST TNTNLLFNKH 
LSVLSRPLVL YIATWLQRKT KSRPTWEPVT DSICLDYNTS SRALILDCIR AGLKEFGIKI
HHTQNYRYLD TLYCHGGFPR ADLLGISHSH LMGYFEDVLN NYATFLHSLT VDEIAEGKLS
SLPETLQQKS FSKLASSLIS YLFELRDSFH LYETSDPLAF LDMKNPNWRN NLPFLVIDEE
ASRLINTLLK KTSKVVRRSQ NPVRLKRYLR QNADEFNLFS EVHVNHTIHP EDLNKVLGVN
SLPNFFELIT ITGDGHRSRA ASFSYKTGAA PRWIVSEIVR PIVGLLAAGE LKYQLYSDGE
LIGSNTYRHG ESFDDRAPWI FDADEQKFNY LGQGSFRDRL ASVLVVSDCE PAKCSPSSQV
RLLGKVSFCE RNVYKITGHV KIPSTFGHFH IRTDASQLNL DCVNVKGKKL VDVISDKPVY
IGKPNLVIDE SKPGAFLNKE EYFWVSTNGT RIPYFSNTVT SGTGAVVRVL EGEIVWVHEC
VYLHDEFLAE LIHNGKGEFE VKFRGLENAH VGLVPGQSAI LTAEPELIAG FKFCDIRLTD
LLVDSVEFSI SWSDAPDNTI RLRLPIALNA VSLLTKTGDV YRECDLGCLT ADDLMDCTFK
FQPDTFETRV KVDLLADDKV DMSVSQEMNL SASGTSKTLP ARAVANLVRR LFRNGSTPEH
VVRLSFFAKN EILENRIPLV YRFKYIPKIR GQFVYLPKTL LLIKHLDQLK LKLTPIWDLN
RDTPDLEFLV EDGDFVKAKL PEIDEYGGWL LWGPGQTNFK PTLIEFDVPV VRKKIDNLGA
FGQALKSALQ CSQGITDFNE PLKQDSIQYA VKYLKQEGNK RTINFSLLDR ILEKMENDID
HEGWSYLNDL IDLVEDIEPA NFHVLKRLLS RPSCLTLMLL RDTSRFHKVW ELADYLPFQW
ILIPISAWIK AIDKVKRKNA SSLELIKKTA PNIYAEVERG LFRDLTAKGL YFNTLVDIAL
VNFTPSKKIW ADTKDPRGSS SIGNKFLIAK SKLFERHQHK LMSISQSKKR DLELIECLDR
CWPVSSLPSD LRGFFRAMGA IEQSEVVKRA YKLTIELPVK VAFYNLDVFL QPLPPREFHA
LSFSLSQLQQ FDREWLQEAM SLATGAAYSA FCNSEFTVVG