| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Shewana3_1875 |
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| Symbol | |
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| ID | 4478183 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Shewanella sp. ANA-3 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_008577 |
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| Strand | - |
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| Start bp | 2220113 |
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| End bp | 2222620 |
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| Gene Length | 2508 bp |
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| Protein Length | 835 aa |
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| Translation table | 11 |
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| GC content | 52% |
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| IMG OID | 639726457 |
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| Product | (NiFe) hydrogenase maturation protein HypF |
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| Protein accession | YP_869512 |
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| Protein GI | 117920320 |
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| COG category | [O] Posttranslational modification, protein turnover, chaperones |
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| COG ID | [COG0068] Hydrogenase maturation factor |
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| TIGRFAM ID | [TIGR00143] [NiFe] hydrogenase maturation protein HypF |
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Plasmid Coverage information |
| Num covering plasmid clones | 8 |
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| Plasmid unclonability p-value | 0.386195 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 40 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGCAGATGC AGCCAGATAA GCGAAGAATA CCGAGATTGA AAAAAGCCAC CTCACCCGCC
AATCAAACCG AGCAACTCGA GCGCCGCCAG CTGCATATCA CGGGCATTGT GCAAGGTGTG
GGCTTTCGCC CCTTTGTTTA CCGCTGGGCG AGTGAGCTTA AATTAACTGG CACTGTGCTA
AATAATGCCA ATGGCGTGAT GATTGAGCTG CAAGGCCCCA CCGCAAACTT AGATAACTTT
GTGCGTGAGT TAACCACCAA TCCGCCGCCG CTGGCGCGCA TCGACCAGAT TACCCAGAGT
CCGTTAGCGG TAAAGCTTGA AGAGACTAGC TTCGATATTA TTCAAAGTGA TAGCCAAAGT
GATGAATCTG GTGAGCATAA CTTTGCAGCG CTGGTTGCCG TATCGGCCGA CAAGAGTACC
TGTCAGGATT GCTTAAGCGA TATGCATAAC CCGCAGGACC GCCACTTTGG CTATGCCTTT
ACCAATTGCA CCAACTGCGG CCCAAGATAC ACCATTATCA ACGCCTTACC CTACGATCGC
CATCATACCG CCATGGCGGA TTTCGCCATG TGCCCCGACT GCGCCAAGGC TTATCAAGAT
CCGCTAAATC GTAGATACCA CGCCCAGCCT GTGAGTTGCC CTAAGTGTGG TCCTCAATTG
AGTTTAAAAT CACCTCAAGG CGAGTTACTT GCACCTAATT CCTTGTCCGC TTTGCAAGAT
AACAGCCTAG CAGTATTGTC GGCGGCGGCC GAAAAACTGG CCCAAGGGCA GATTCTTGCG
ATAAAGGGCT TAGGTGGCTT CCACTTAATG TGCGATGCAA CCAACACCCT AGCGGTCAAT
CAATTAAGGC AACGCAAGCA ACGAAAAGCC AAGCCACTAG CGGTGATGAT GCCGAGCATC
GAAGTGGCAA AACGCTATGT AACGGGCACA CAGGTAGAGT GGCAAACCTT AAGCGCGCAG
GAGCGGCCCA TCGTACTAAT GCAGGCGCAG GATAAACACA ATCTGAGCCC TGAGATTGCG
CCTAATATCC CAAAGCTCGG GATATTTTTG CCCTACACAC CGCTGCATCA TTTACTGCTC
GGGCAATTTA ACGGCCCACT GGTCGCGACC AGTGCGAATG TCTCTGGCGA ACCGATTATC
ACCGATTGTG ATGAGCTTAT CAGCCAACTA GGCCATGTGG TGGATGCCAT AGTCGATCAC
AACCGCCCCA TACTCAACGG CTGTGATGAC AGCGTGGTGC AACTTATCCA ACCGCCAAAC
GGCTGTGCGC CACAGGTACA AGTGCTGCGT TTAGCGCGGG GATATGCGCC ATTAAGCTTC
CCGTTACCCA AACCGCTGAG TCACTCCATT CTTGCCGTGG GCGCCCAACA AAAAAATGCC
ATTGCTTTAG GTTTTGGCTC GAATGTGTTT TTAAGCCCGC ATATTGGCGA TCTCTTTAGT
GTCAGCGCCG AGCAGTACTT CGAGCGAACC TTGGCGACCT TCGCCCGTCT GTATCATTTC
AGCCCCGAGC TGATTGTCCA CGATAAGCAC CCAGACTACG CACCATCGCG CTGGGCAGAG
ACGCAGCAAC AGCACAGCCT TGATACACAA AGCCAAGACA CGCAGCCAAT CCAAACCTTA
AGTGTGCAGC ATCACCACGC CCATGTGCTC AGCGTGATGG CCATCAATCA ATATCAAGAT
CCAGTATTAG GCTTTAGTTT CGATGGCACA GGGCTTGGAA ACGATGGCAG CCTCTGGGGC
GGAGAGGTCT TACTGACCAC CCTTAACGGC GCCGAGCGGA TTGCCCATTT CGAGGCTATT
CCCTTGCTCG GTGGAGAACA GGCAATTAAG CAACCTGTGC GTTTGCTGCT GGCATTACTG
TTTCAGCAGA TGAGTCTCGA GGAAGTGCAA GCCCTTAAGT TGCCGATTCT GACAACCTTA
AGCCCCATCA CCTTAAGCAA TCTGCATCGG ATCTGGCAAA ACGGCCATGG GATTAATAGC
TCATCGGTGG GACGCTTGTT CGATGCCCTC GCCTGCGCCT TAGGCTTTAT CGACACCACT
CAATTTGAAG GTCAAGCGGG TATGTTAATT GAAGCAGCAG CAAGACGGGC CGATGCCAAA
CAACTGCCAA CGCTGATGCT CGACTTACCC TTGGAAATCT CAGATATGCC CAGTGATAGC
TCGATACACG AACCGCATAT CTGGCGCAGT AGCCAGCTCT TTAAGCAGAT AATCACGCTA
ATCACCGAAG CGCCGCTCAC TGACGTTCGG CAAGCGCAGT TAGCCCGCGC CTTTTTACAT
TGTGTGGGGG ATGCCATTTG TGGTTATGCC GCGCGCTATC CAGCCCTGCC CGTGGTGCTG
TGCGGCGGAG TGTTTCAAAA TCAATATTTG CTTGAATATT GCCTCGGTAA ACTGCACCTA
CAGGGCAATA CCGTGCTGCC TAACAAACAT ATTCCCGTCA ACGATGGCGG TATTGCCCTC
GGGCAGCTTT GGTATGGTAT CCATCAAAGC GCAAGCAATA ACCAGTGA
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| Protein sequence | MQMQPDKRRI PRLKKATSPA NQTEQLERRQ LHITGIVQGV GFRPFVYRWA SELKLTGTVL
NNANGVMIEL QGPTANLDNF VRELTTNPPP LARIDQITQS PLAVKLEETS FDIIQSDSQS
DESGEHNFAA LVAVSADKST CQDCLSDMHN PQDRHFGYAF TNCTNCGPRY TIINALPYDR
HHTAMADFAM CPDCAKAYQD PLNRRYHAQP VSCPKCGPQL SLKSPQGELL APNSLSALQD
NSLAVLSAAA EKLAQGQILA IKGLGGFHLM CDATNTLAVN QLRQRKQRKA KPLAVMMPSI
EVAKRYVTGT QVEWQTLSAQ ERPIVLMQAQ DKHNLSPEIA PNIPKLGIFL PYTPLHHLLL
GQFNGPLVAT SANVSGEPII TDCDELISQL GHVVDAIVDH NRPILNGCDD SVVQLIQPPN
GCAPQVQVLR LARGYAPLSF PLPKPLSHSI LAVGAQQKNA IALGFGSNVF LSPHIGDLFS
VSAEQYFERT LATFARLYHF SPELIVHDKH PDYAPSRWAE TQQQHSLDTQ SQDTQPIQTL
SVQHHHAHVL SVMAINQYQD PVLGFSFDGT GLGNDGSLWG GEVLLTTLNG AERIAHFEAI
PLLGGEQAIK QPVRLLLALL FQQMSLEEVQ ALKLPILTTL SPITLSNLHR IWQNGHGINS
SSVGRLFDAL ACALGFIDTT QFEGQAGMLI EAAARRADAK QLPTLMLDLP LEISDMPSDS
SIHEPHIWRS SQLFKQIITL ITEAPLTDVR QAQLARAFLH CVGDAICGYA ARYPALPVVL
CGGVFQNQYL LEYCLGKLHL QGNTVLPNKH IPVNDGGIAL GQLWYGIHQS ASNNQ
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