Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Shewana3_1825 |
Symbol | |
ID | 4477885 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Shewanella sp. ANA-3 |
Kingdom | Bacteria |
Replicon accession | NC_008577 |
Strand | + |
Start bp | 2160481 |
End bp | 2163678 |
Gene Length | 3198 bp |
Protein Length | 1065 aa |
Translation table | 11 |
GC content | 44% |
IMG OID | 639726409 |
Product | ATPase-like protein |
Protein accession | YP_869464 |
Protein GI | 117920272 |
COG category | [R] General function prediction only |
COG ID | [COG0433] Predicted ATPase |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 8 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 14 |
Fosmid unclonability p-value | 0.071271 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGTCTCAAG AAGTCATCAC CAAATTTTCC GACTCTATTG TGGGTCGCAG TAATATTTTG CAGCATATTT CCTGCATGCC TAATCCGCAA TTTGCCCAAC TGCCATTATC CTTCCCCAGT TCATCGTTAA AACTGTTACG TGCAGAAGAA ATTAATGATG AAAATCCAAG CGCATATAGG CTGGCTTTGG CTAATGTTTA TGCTGCCTTA GAGCATGAAG ATCAAATTCA GTTTATCTAT TTGCTTGATG TGAGTTTAGA AGGTGTTGCT CTTTATTTTG GTGTTAACCA GTTAACCTCT GCAATAGATG GACCTGGGCA TGAGTCACTT AAAAATTTAC GCGGGGCGCT TGAGGGCCAA TTGCCAGGGA TTAATCTTTC TAGGCTAGAA GGCATTGAGC CCTTGATGGC TCGTCTACAA GCAAGTAAGC ATAAAGGTGT TGTACTTGGT ATTCCAACAG GAAAGAGTCA AGATCAAGAC AGTAACGAAG AAGATTATCA AGGTATTGAA AGGCTTGTTA GAACTCTGCT TTCAGGCAGC GGCAGTGATT CAGGCAGTAT CAATTCTGCT AATTGGCAAA TGGTTGTCGT GACGCAACCT TTAACTCGTA AAGATGCAAG AGTTTATCTA GATGATGCCT ATGAACTGGC AAGCGAACTA TCCATTCAGG TGAAAACCAG TGTTCAAGCG GGTAGTAATA ACAATGAGCA AAAAGGCAAT AGTTTCAGCG AGGGGACATC GGATAGTACC AATACTGGGC GCACCGATAC TCGCGGTAAA AATGACGGTG TCTCGCAGAG TAAAAATATT GGAAAGAGCT CCAATGACAA TTCATCATCC AATCACTCGT CAGGAACCTC TAGTTGCGAT ACTCAAGGCA AAAATTGGGG AACCAATACC AGTGTTGCTG ATACTAAAGG GAGTAGCCAC TCAACCAGTA TTAACGAGAC CTATAATCTA AATCGCTCTG CTGGGAGCAA TATTGGTTTA ACTAAAGAAG TGACCGATAA GCGCGCCCAG CATCTGCTCG ATCATATTGA AAAATCCCTT ATCCCTAGGT TGCAAAAGGG CGTAACTAAA GGCTTATTTG GCACAGCCAT TTACCTTGCG GCGGATACGC CATCCAGTTA TCGCCGTTTA AAAAATACCG TTTGTTCCAC CTATCAAGGG GGAGAAATCA CTGTCAGCCC ACTCGAAGTC GTTGATCTGA ATGAAACCTC TGCCGCACAA CTATTACAGT TACCAACGTT AAAGCAATCA CTTAACTATA GAAACTCATT GTTTCACAGT ATCACTAGCA GTCATGAATC ACAGTTTGCG ACGTTATTGA CCTGTGATGA GTTAGCTATG GTTGCAGGAT TACCACGGCA TGAGTTACCA GGACTGCGCC GTCGCAAAAC AGTAGAGTTT ATTGTTGATT TACCGAGAGT TAAGGCCGAT GACGCTCTTA AATTAGGAGC TGTTATTGAT CGAGGTCGTA AGCAACACAC TAATTCAATC AACCTCAACA AGGCTGATTT TAATAAACAT ATCTTTGTGA CTGGGGTCAC TGGAGCGGGT AAAACCACAA CCTGCCTTAA TTTATTAATT GAATCGGCAT TGCCTTTTTT AGTTATTGAA CCCGCCAAAA CCGAGTACCG CGCCTTACAT CAACATATGC CTAATCAGGT GGCGTATTAT CGTCCTAATG GCGATCAACA CCGTAGTTTG CGGCTTAATC CATTCGCATT GGTGCATCCC AAACAGCATA TTAGAAGTCA CGCGTCATTT TTACGAAATG TATTTGCTGC GATTTTCCCG ATGGAAGCAT CAATGCCCTT TTTGGTTGAG CAAGCGATTG TGCGTGCCTA CGAGGAAAAG GGCTGGGATC TAACGGATAA CACTTGTTTT TGCTGCGATG ATCCTTTTGC GCCTGCGGCG CAGGCTTGGC CAACCATGGG AGATATGATC CGTCAGCTTG ATCAGTTGAT CCCAGAGCAA GGAATGGGTA AAGAGTTTGA AGAAAAGTAT CGCGGCTCTC TGGTATCACG TTTGACCAGT CTTACTCATG GCGTACTCGG GGATATTCTC AATGTGCCAC AATCGCTGAA AGTTAATGCG CTACTCGATA ACAAGGTCGT AATTGAGTTA GAAGAAATTA AAGATGGCGA AGGTAAGGCG CTAATGATGG CGCTGTTGTT GGGTGCGGTG AGTGAAGCCA TACGCTACCG ACATGGAAAA GACAGTACAT TTCGCCATTT AACATTGATA GAAGAAGCCC ATCGTTTGTT GGCGAAACCA GAACCAGGCG ATAAGGCGCG CGCAATGGCC GTTGACGCCT TTGCTGACTT ACTTGCCGAG GTGCGAAAAT ACGGTGAAGG CTTGATCATT GCAGATCAAA TTCCAGCCAA GTTAGTGGCT GATGTGATTA AAAATACCCA TATCAAGATT GTTCATCGTT TGTTTGCTGA GGACGATAGG CGTGCAATGG GCGAAGCCAT GATGATGGAT GAGGCACAGC GTGATTATTT ACCGAACTTG GCTACAGGTG AGGCTGTTAT TTTTTGTGGC GGATGGCATG GACCAGCCCA TGGGGCTATT CGCGCAGATC TAGCGCAAAC CGATGGAGAT CCATTATCCG AGGATGATAT TAATCAACTG GCAGTCAATC AGCTCTGGCA AGAGAGAGCC AGATATTATC CTGCACTTAC TCACCTGGGC TGGCTTACCC AAGAAGAACA AAAATTATCT TTTGCTGATT TTGTACGAAC TGGCCGCAAG GCATTGAATA TATTATTAGA ATTAACCCCA TCGATTTTGG GGACGTCGAG TATAACCGAG TTAAAACAGC TAAAACTTTC TGAGGCCTTG ATACAGTGGC TAGAGAAATG GCAGCCAATT GCAGCGCTGA ATCCCGTCAA TCAAGATGAA TGGAGCAGGG GGGCAAATTT ACCATTGCCG ACTCATCCTT TTACGGTGCT ACTACTCGCA TTAATGAAAG ATTGTCATCC AACCCTGCGT ACAAAATCGA AAACAAATGC GATTTGGCCT TTTCCTGCCA CCGATTTAGC AATCTGGAGT GAGGGCTTAT CAACCATGCT CAATACCTTA GCGACCAGTA CTGCTACTGA GGTGATAAAT AAGCTCAACG CGGCAAAATC TAGCAGTAGA GAATGTCAAA AGGTTCTTCA GCAATTATCT TTTTATCAAA AATTTTAA
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Protein sequence | MSQEVITKFS DSIVGRSNIL QHISCMPNPQ FAQLPLSFPS SSLKLLRAEE INDENPSAYR LALANVYAAL EHEDQIQFIY LLDVSLEGVA LYFGVNQLTS AIDGPGHESL KNLRGALEGQ LPGINLSRLE GIEPLMARLQ ASKHKGVVLG IPTGKSQDQD SNEEDYQGIE RLVRTLLSGS GSDSGSINSA NWQMVVVTQP LTRKDARVYL DDAYELASEL SIQVKTSVQA GSNNNEQKGN SFSEGTSDST NTGRTDTRGK NDGVSQSKNI GKSSNDNSSS NHSSGTSSCD TQGKNWGTNT SVADTKGSSH STSINETYNL NRSAGSNIGL TKEVTDKRAQ HLLDHIEKSL IPRLQKGVTK GLFGTAIYLA ADTPSSYRRL KNTVCSTYQG GEITVSPLEV VDLNETSAAQ LLQLPTLKQS LNYRNSLFHS ITSSHESQFA TLLTCDELAM VAGLPRHELP GLRRRKTVEF IVDLPRVKAD DALKLGAVID RGRKQHTNSI NLNKADFNKH IFVTGVTGAG KTTTCLNLLI ESALPFLVIE PAKTEYRALH QHMPNQVAYY RPNGDQHRSL RLNPFALVHP KQHIRSHASF LRNVFAAIFP MEASMPFLVE QAIVRAYEEK GWDLTDNTCF CCDDPFAPAA QAWPTMGDMI RQLDQLIPEQ GMGKEFEEKY RGSLVSRLTS LTHGVLGDIL NVPQSLKVNA LLDNKVVIEL EEIKDGEGKA LMMALLLGAV SEAIRYRHGK DSTFRHLTLI EEAHRLLAKP EPGDKARAMA VDAFADLLAE VRKYGEGLII ADQIPAKLVA DVIKNTHIKI VHRLFAEDDR RAMGEAMMMD EAQRDYLPNL ATGEAVIFCG GWHGPAHGAI RADLAQTDGD PLSEDDINQL AVNQLWQERA RYYPALTHLG WLTQEEQKLS FADFVRTGRK ALNILLELTP SILGTSSITE LKQLKLSEAL IQWLEKWQPI AALNPVNQDE WSRGANLPLP THPFTVLLLA LMKDCHPTLR TKSKTNAIWP FPATDLAIWS EGLSTMLNTL ATSTATEVIN KLNAAKSSSR ECQKVLQQLS FYQKF
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