Gene Shewana3_1817 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagShewana3_1817 
Symbol 
ID4477506 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameShewanella sp. ANA-3 
KingdomBacteria 
Replicon accessionNC_008577 
Strand
Start bp2143719 
End bp2144261 
Gene Length543 bp 
Protein Length180 aa 
Translation table11 
GC content47% 
IMG OID639726401 
Producthypothetical protein 
Protein accessionYP_869456 
Protein GI117920264 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones32 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones13 
Fosmid unclonability p-value0.0233956 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGTCCGACA GACTTACCAA ATTACTTAAC AGCTTTAGCA ACCATATCAG TGTGCCCTGG 
AGTAACACCA TCTCCGCCGA GGAAAAAGCA ATTTTCGTGG TGTATGACAA GGCCGATGAA
CTCAAGCTTA GAGCACGATT GACTGAATTT GAACAGGCCA GTATAGAGGC CCAACATCCA
TGGTTATTGC TCGATTTAAC CAACGCCTTT GCCAACTGGA TGGCCGAGCA GGATTACAAA
GAAGGCTATT TTGAAGACCC TGAATACCTC GAAGGTAGCT ACGACTACTT TGCTGATGAA
CTAGTGAAAT TACTGAGCGC TGAAATTAAC AACCAGCAAA CGGCCGACAC TGTCGTAGCG
TTAATGGGAT GCGGTGCGCT ATTTGGCTTC CTGTCAGTAT CTGCACTGGT CAAATCGCTG
GCTGCGCAGG TGAATGGCCG CTTGGTGGTG TTTTTCCCCG GAGAATATCA CGACAATAAC
TACAAATTAC TTGATGCCAA GGATGGATGG GGCTATCAAG CCACCGCTAT CACAGCCGTT
TAA
 
Protein sequence
MSDRLTKLLN SFSNHISVPW SNTISAEEKA IFVVYDKADE LKLRARLTEF EQASIEAQHP 
WLLLDLTNAF ANWMAEQDYK EGYFEDPEYL EGSYDYFADE LVKLLSAEIN NQQTADTVVA
LMGCGALFGF LSVSALVKSL AAQVNGRLVV FFPGEYHDNN YKLLDAKDGW GYQATAITAV