| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Shewana3_1768 |
|---|
| Symbol | |
|---|
| ID | 4478655 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Shewanella sp. ANA-3 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_008577 |
|---|
| Strand | + |
|---|
| Start bp | 2081859 |
|---|
| End bp | 2082185 |
|---|
| Gene Length | 327 bp |
|---|
| Protein Length | 108 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 51% |
|---|
| IMG OID | 639726351 |
|---|
| Product | type IV pilus biogenesis protein pilZ |
|---|
| Protein accession | YP_869407 |
|---|
| Protein GI | 117920215 |
|---|
| COG category | [N] Cell motility
[U] Intracellular trafficking, secretion, and vesicular transport |
|---|
| COG ID | [COG3215] Tfp pilus assembly protein PilZ |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 18 |
|---|
| Plasmid unclonability p-value | 0.598238 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 21 |
|---|
| Fosmid unclonability p-value | 0.61176 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGGTCGATC TTGTCGTCAA TTTTGATACC TTACATCAGC TTTACCGCGC CTATATGCCG
TTTATTAAAC CGGCAGGGCT GTTTGTCGCC ACCGGGGAAA CCCATTATCT CGGTGAGACA
TTAACCATTG CCTATCGTTT ACCCGGCGCG ACCACCTCAA ACGAGTTTCG TGGCGTGGTT
GTGTGGATTA ATCCGCTGGG CGCATCGGGC GGCCGTCCCG TGGGGATCGG GATTAAAATC
GTTTCTGATC CCGATAGCCA TAAACACCAT ATCGAAAAAT TGTTATCCCG TGAGCTCGCT
TCCGGCGACT TAACCTGCAC TATGTAA
|
|---|
| Protein sequence | MVDLVVNFDT LHQLYRAYMP FIKPAGLFVA TGETHYLGET LTIAYRLPGA TTSNEFRGVV
VWINPLGASG GRPVGIGIKI VSDPDSHKHH IEKLLSRELA SGDLTCTM
|
|---|
| |