| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Shewana3_1728 |
|---|
| Symbol | |
|---|
| ID | 4479561 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Shewanella sp. ANA-3 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_008577 |
|---|
| Strand | - |
|---|
| Start bp | 2034074 |
|---|
| End bp | 2035408 |
|---|
| Gene Length | 1335 bp |
|---|
| Protein Length | 444 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 47% |
|---|
| IMG OID | 639726311 |
|---|
| Product | succinylarginine dihydrolase |
|---|
| Protein accession | YP_869367 |
|---|
| Protein GI | 117920175 |
|---|
| COG category | [E] Amino acid transport and metabolism |
|---|
| COG ID | [COG3724] Succinylarginine dihydrolase |
|---|
| TIGRFAM ID | [TIGR03241] succinylarginine dihydrolase |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 19 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 18 |
|---|
| Fosmid unclonability p-value | 0.212978 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGAAGCACT TTGAAGCGAA TTTCGACGGA CTCGTTGGGC CAACCCACAA TTATGCCGGT
TTGTCTTTTG GCAATGTGGC CTCACTCAAC AACGCCGCTT TAGTCTCAAA TCCTAAAGCC
GCCGCTAAAC AGGGTTTGCA AAAAGCCAAA GCACTCGCTG ATTTAGGGAT GATCCAAGGC
ATGTTAGCGC CACAAGAGCG CCCAGATCTT AATACACTGC GCCGAATTGG TTTTTCTGGC
AGTGATGCCC AAGTTTTACA ACAAGCCGCT AAAACCGCGC CTGCGCTGCT TAATGCCTGT
TGCAGTGCTT CAAGTATGTG GACGGCGAAT GCCGCAACCG TGTCGCCCAG TGCCGACACC
CGTGACGGTA AACTGCATTT TACCCCTGCC AACTTAGTCG ATAAGTTGCA TCGCAGTATC
GAGCCCACCA CAACGGGGCG CATCTTAACA GCAACTTTCA ACGATCCCCA CTATTTTCAT
CACCATAATC ATTTACCTGA GCATAATAGC TTCGGTGATG AGGGCGCCGC GAATCATACT
CGCCTGTGTC AAGAATATGG TCATGCTGGG GTCGAGCTGT TTGTTTACGG CCAAGAAGCC
ACCAATCCTA ATGCACCAAG ACCACAAAAA TATCCCGCCA GACAAACCCT CGAAGCGTCG
ATGGCGATAG CAAGATTGCA CCAACTCGAG GAGGATAACT GCGTCTTTAT TCAACAAAAT
CCCGATGTCA TTGACCAAGG GGTATTCCAC AATGACGTGA TCGCCGTGGG TAACCAAAAT
GTGCTGTTTT ACCATGAGCA GGCATTCTTA AATACACAGG CTAAATTGGA TGAAATAAGA
CGAAAACTCG ATACCGAATT ATTCTTTATC GAGGTTCCAA CCACCAAAGT GGCGATTAAC
AATGCGGTAA AGAGTTATCT ATTCAATACC CAAATCATCA CTCTCCCCTC TGGCGAAATG
GCCATCATTG CCCCAACAGA CTGCCAAGAA AATCCTGCTG TTTATGCATA TTTAAATGAG
CTACTCACGT TAAATACGCC AATCAAGCAA GTGCTGTATT TCGATGTGAA ACAAAGTATG
CAAAACGGTG GCGGCCCCGC CTGCTTGCGT TTACGGGTTG CCATGAATGA GCGAGAAGTG
GCTGCTGCGA ATCAACACAC TTTACTTAAC GATGCTTTAT TCGCGCGTTT AAATACTTGG
GTGGATAAAC ACTACCGCGA CCGTTTATCG ACTCAAGATT TAGCTGATCC GCAATTAGTG
GTTGAATCAC GCACCGCATT AGATGAGCTC ACCCAAATCA TGAAATTGGG AAGTGTGTAT
CCATTCCAAA GATAA
|
|---|
| Protein sequence | MKHFEANFDG LVGPTHNYAG LSFGNVASLN NAALVSNPKA AAKQGLQKAK ALADLGMIQG
MLAPQERPDL NTLRRIGFSG SDAQVLQQAA KTAPALLNAC CSASSMWTAN AATVSPSADT
RDGKLHFTPA NLVDKLHRSI EPTTTGRILT ATFNDPHYFH HHNHLPEHNS FGDEGAANHT
RLCQEYGHAG VELFVYGQEA TNPNAPRPQK YPARQTLEAS MAIARLHQLE EDNCVFIQQN
PDVIDQGVFH NDVIAVGNQN VLFYHEQAFL NTQAKLDEIR RKLDTELFFI EVPTTKVAIN
NAVKSYLFNT QIITLPSGEM AIIAPTDCQE NPAVYAYLNE LLTLNTPIKQ VLYFDVKQSM
QNGGGPACLR LRVAMNEREV AAANQHTLLN DALFARLNTW VDKHYRDRLS TQDLADPQLV
VESRTALDEL TQIMKLGSVY PFQR
|
|---|
| |