Gene Shewana3_1702 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagShewana3_1702 
Symbol 
ID4479535 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameShewanella sp. ANA-3 
KingdomBacteria 
Replicon accessionNC_008577 
Strand
Start bp1999832 
End bp2002888 
Gene Length3057 bp 
Protein Length1018 aa 
Translation table11 
GC content49% 
IMG OID639726285 
Productacriflavin resistance protein 
Protein accessionYP_869341 
Protein GI117920149 
COG category[V] Defense mechanisms 
COG ID[COG0841] Cation/multidrug efflux pump 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones18 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones24 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGAACCTCA CCCGTTTAGC GATAAAACGC CCTGTCACCA CCAGCATGTT TTTCTTTGCT 
ATCTTGCTGT TTGGTTTGGC TTCTAGTCGC CTATTGCCGC TCGAAATGTT CCCCGGCATC
GATATTCCAC AAATTGTGGT GCAAGTGCCT TATAAAGGCT CAACGCCAGC GGAAGTTGAG
CGCGATATCA CTAAGGTGCT CGAAGAGTCC CTCGCCACTA TGGGCGGTAT CGATGAGCTG
GAGTCCGAAT CCTCCCAAGA GGGTTCGGAA ATCGAAATCA ATATGAAATG GGGCGAAAAC
GTCGCCACTA AAAGCTTAGA AGCGCGGGAA AAAATCGATG CGGTGCGGCA TTTATTGCCC
AAGGATGTTG AACGGGTGTT TATCCGCCAA TTCTCCACCG CCGATATGCC AGTATTGACC
ATACGGATTT CGAGCGACCG CGAGCTCTCT GGCGCATTCG ACTTGCTTGA TAAACAGCTC
AAACGCCCGC TGGAGCGGGT CGAGGGGGTG TCTAAAGTCA ATCTCTATGG GGTTGAGCAA
AAGCAGATTG AGGTCAGGAT CAATGCTAAC CGCCTCGCCG CCAGTGGCTA TTCGGCAACC
GAGTTACAGA CGCGTCTCGG CCGCGAAAAC TTTGTGTTGA GCGCTGGCAC TTTGCGGGAA
AGTAATCTGG TTTATCAGGT GTCACCTAAG GGCGAGTTTC GCAATCTAGA AGACATTAAA
GCCCTAGTGC TATTGCCTGG GCTGACCTTA GGTGACGTTG CCGATGTGCA ATTTGCGCTG
CCTGAACGGG TAGAAGGGCG TCATTTAGAT AAGCATTACG CCGTGGGTTT GGATGTATTT
AAAGAATCCG GCGCCAACTT AGTGGAAGTG TCTGATCGGG TATTAAAGGT GATTGAGCTT
GCCAAGCAAG ATCAACAATT CCAAGGTATT CGCTTGTTTA TCATGGAAGA TCAAGCCTCT
GGCGTAAAAT CTTCCCTCTC GGATCTGCTG CTGTCGGGAT TAATCGGCGC CTTGCTGTCT
TTTATCGTGC TGTATTTATT CCTGAGAAAC TTCAAGATGA CCTTGATTGT GGTGTCATCA
GTGCCGATTT CGATTGGTAT GACACTGGCC GCCATGTATC TACTGGGTTA CAGCTTAAAC
ATTCTGTCGA TGATGGGACT GTTATTAGCG GTCGGTATGC TTATCGATAA TGCGGTCGTG
GTCACCGAGA GTGTGCTGCA GGAGAAACAA GGTAAAAATA CTAAGAGTGT TCAAGACAAT
GAAAATGCGG TCATGACAGG GGTCGATAAA GTCAGTCTTG CCGTACTTGC GGGCACTATG
ACCACGGCTA TCGTATTTTT ACCCAACATT TTTGGGGTTA AAGTCGAGCT CACCATCTTC
CTTGAGCATG TGGCGATTGC GATTTGTATT TCGCTGGCGG CCTCACTGTT AGTGGCTAAA
ACATTAATTC CATTGATGTT GACTAAGTTT CACTTCGATA TCACGCCGGA GAAAGCGCCA
GGTAAGTTAC AAAACTTCTA CAATCGTAGC CTCAACTGGG TACTGCTGCG TCCTTGGCGT
TCTGGGCTGA TTTCGGTGGC GATTTTAATA TCCACCGCCC TGCCGCTGTC GATGGTCAAA
CAGGATCAGG AGGACAGCCA AAGTAAGGAG CGCATTTACG TCAACTACCA AGTGGAGGGT
CGCCATAACC TCAATGTGAC CGAGGCAATG GTGAGCCAAA TGGAAGAGTA TCTTTATAAT
AATAAAGAGG AATTCCATAT CGACTCAGTG TATAGCTACT ATGCGCCCGA CGATGCCTCT
TCGGTGATTT TGCTGAAAAA AGACCTGCCC ATGCCACTGG ATGAATTAAA GAAGAAAATC
CGCAGCGGTT TTCCTAAATT CTCCATTGCT AAGCCTCAAT TTGGCTGGGG CAATGATAAC
TCGGGCGTAC GCGTCACGCT CACAGGTCGC TCCACCTCAG AGCTTATCCA TTTGAGTGAG
CAAGTATTAC CCTTACTCTC CAATATCAAA GGGTTAGTGG ATGTGCGATC CGAAGTGAAC
GGTGCGCAGC AGGAAGTGGT GATCCGCATA AATCGTCAGA TGGCGGCACG ACTGGATTTA
AAACTCAACG AAGTGGCTTC TAGCATATCA ATGGCCCTGC GCGGCTCACC GCTACGCTCA
TTTAGACACG ACCCCAATGG GGAACTGCGT ATCGAAATGG CCTATGAGAA GGAATGGCAA
AAATCCCTCG AGAAGCTAAA ACAACTGCCG ATCGTGCGTA TCGACCAACG TCTGTATACC
CTTGATAACC TTGCCAGTAT CGAGATCCAA CCTAGGTTCG ATACCATCAA GCACTATAAT
CGACAAACCT CGCTTTCTAT CGGGGCGAAC TTAGATAATC TCACCACAGA GGAAGCCCAA
ACGAAGATCA AACAGGTGAT GGAAAATGTG CGCTTCCCGA ATGGTTATAA CTATTCGCTG
CGCGGTGGAT TTGAGCGTCA GGATGAAGAT CAGAGCGTGA TGGCTATCAA TATGCTGCTT
GCTATCGCTA TGATTTACAT CGTAATGGCG GCGCTGTTTG AATCTTTATT ATTACCGACG
GCGATTATCA CCTCAATTCT GTTCTCGATC ACAGGGGTCT TTTGGGCTTT GCTGCTCACA
GGCACGCCTA TGTCAGTCAT GGCCATGATA GGGATCTTGA TTCTAATGGG CATTGTGGTG
AATAACGGCA TCGTATTGGT CGACCAAATC AACCAAATGA CGCCTGAACT CGATAAGCTG
CCGGATACCA TACGCGAAGT CTGTATTACC CGTCTGCGCC CGGTACTGAT GACAGTGGGA
ACAACCGTGC TGGGCCTTGT GCCACTGGCG ATGGGCGATA CCCAAATCGG CGGCGGTGGC
CCACCGTACT CGCCAATGGC CATCGCGATT ATCGGCGGTT TGTCGTTCTC AACGGTGACG
AGTCTATATT TGGTGCCATT ATGTTACCAA CTGCTCTACA GAATGCGTTA TCGCGCCGCG
GTGCGCCTGG GTGAATCGAA CCGCATCGCC CAAAAGCTCC TACCTTGGAC GGTTTAA
 
Protein sequence
MNLTRLAIKR PVTTSMFFFA ILLFGLASSR LLPLEMFPGI DIPQIVVQVP YKGSTPAEVE 
RDITKVLEES LATMGGIDEL ESESSQEGSE IEINMKWGEN VATKSLEARE KIDAVRHLLP
KDVERVFIRQ FSTADMPVLT IRISSDRELS GAFDLLDKQL KRPLERVEGV SKVNLYGVEQ
KQIEVRINAN RLAASGYSAT ELQTRLGREN FVLSAGTLRE SNLVYQVSPK GEFRNLEDIK
ALVLLPGLTL GDVADVQFAL PERVEGRHLD KHYAVGLDVF KESGANLVEV SDRVLKVIEL
AKQDQQFQGI RLFIMEDQAS GVKSSLSDLL LSGLIGALLS FIVLYLFLRN FKMTLIVVSS
VPISIGMTLA AMYLLGYSLN ILSMMGLLLA VGMLIDNAVV VTESVLQEKQ GKNTKSVQDN
ENAVMTGVDK VSLAVLAGTM TTAIVFLPNI FGVKVELTIF LEHVAIAICI SLAASLLVAK
TLIPLMLTKF HFDITPEKAP GKLQNFYNRS LNWVLLRPWR SGLISVAILI STALPLSMVK
QDQEDSQSKE RIYVNYQVEG RHNLNVTEAM VSQMEEYLYN NKEEFHIDSV YSYYAPDDAS
SVILLKKDLP MPLDELKKKI RSGFPKFSIA KPQFGWGNDN SGVRVTLTGR STSELIHLSE
QVLPLLSNIK GLVDVRSEVN GAQQEVVIRI NRQMAARLDL KLNEVASSIS MALRGSPLRS
FRHDPNGELR IEMAYEKEWQ KSLEKLKQLP IVRIDQRLYT LDNLASIEIQ PRFDTIKHYN
RQTSLSIGAN LDNLTTEEAQ TKIKQVMENV RFPNGYNYSL RGGFERQDED QSVMAINMLL
AIAMIYIVMA ALFESLLLPT AIITSILFSI TGVFWALLLT GTPMSVMAMI GILILMGIVV
NNGIVLVDQI NQMTPELDKL PDTIREVCIT RLRPVLMTVG TTVLGLVPLA MGDTQIGGGG
PPYSPMAIAI IGGLSFSTVT SLYLVPLCYQ LLYRMRYRAA VRLGESNRIA QKLLPWTV