Gene Shewana3_1686 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagShewana3_1686 
Symbol 
ID4477196 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameShewanella sp. ANA-3 
KingdomBacteria 
Replicon accessionNC_008577 
Strand
Start bp1980869 
End bp1981744 
Gene Length876 bp 
Protein Length291 aa 
Translation table11 
GC content52% 
IMG OID639726269 
Product1,4-dihydroxy-2-naphtoate prenyltransferase 
Protein accessionYP_869325 
Protein GI117920133 
COG category[H] Coenzyme transport and metabolism 
COG ID[COG1575] 1,4-dihydroxy-2-naphthoate octaprenyltransferase 
TIGRFAM ID[TIGR00751] 1,4-dihydroxy-2-naphthoate octaprenyltransferase 


Plasmid Coverage information

Num covering plasmid clones21 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones36 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGAATCCTT GGATTTTAGC CATCAGGCCC CGCACCTTAC CCGCGGCAAT CGGTCCCCTG 
TTAATTGGTA ATATTCTGGC ACTGCACCTT GAGCGTTTTA GCTGGTTAAT TGCCGCCACC
TCGATGTTGT GCGCCATCCT ATTGCAGATC GCCGTCAACC TCGCCAATGA CTACTTTGAC
TTTAAAAACG GCATTGATAC CGCCGAACGT ATTGGTCCGG TTCGCGTAAC CCAGAGTGGC
ATGATACCCC CCCATAAAGT ACGCAATGCG ATGGTCCTCT GCTTAGTACT AGCATTAACC
GTGGGCTCGT ATTTGATTTG GCATGGCGGC TGGCCGATTG CTATTTTAGC GGCGGCGGCC
ATTTTAGGCG CCCTCGGCTA CAGCGGCGGC CCGTATCCTC TGGCATCACA CGGGCTAGGT
GAAGTCGCCG CCTTTGTGTT TTTTGGCTTA GTCGCCGTGG TCGGCAGCTA TTATCTGCAG
GCGGGTGATA CCAATATGAA TGCTTGGCTA CTAGGCTGTG CGATTGGCTT ATTTAACGCC
GCCATTATGT TGGTCAACAA CACCCGCGAT ATTCGTACCG ACACCCAAGC GGGCAAACAT
ACGCTCGCGG TAAGGATTGG CGAGGCGCAG GCCAAAGTCT TGTATCAAGC CTTAATTTAC
TTGCCCTTTG GTTTAGTGAT CGCGGGATTC TTACTGGGGA TTCTGCCGGG CCTACCGGTA
CTGCTGGCGG GCTTATCCCT GCTTATTGCC CGTAAACTCA GTAGCGATTT CTATGCCGTA
TCGGGTGAAG CGCTCAATCC GCTATTGGGA CGTACGGCAA AACTCACCAT GATTTTCAGT
ACTCTATTCA GTGTGGGACT AGTGTTTACC GCCTAA
 
Protein sequence
MNPWILAIRP RTLPAAIGPL LIGNILALHL ERFSWLIAAT SMLCAILLQI AVNLANDYFD 
FKNGIDTAER IGPVRVTQSG MIPPHKVRNA MVLCLVLALT VGSYLIWHGG WPIAILAAAA
ILGALGYSGG PYPLASHGLG EVAAFVFFGL VAVVGSYYLQ AGDTNMNAWL LGCAIGLFNA
AIMLVNNTRD IRTDTQAGKH TLAVRIGEAQ AKVLYQALIY LPFGLVIAGF LLGILPGLPV
LLAGLSLLIA RKLSSDFYAV SGEALNPLLG RTAKLTMIFS TLFSVGLVFT A