Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Shewana3_1646 |
Symbol | |
ID | 4476101 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Shewanella sp. ANA-3 |
Kingdom | Bacteria |
Replicon accession | NC_008577 |
Strand | - |
Start bp | 1936816 |
End bp | 1938744 |
Gene Length | 1929 bp |
Protein Length | 642 aa |
Translation table | 11 |
GC content | 53% |
IMG OID | 639726229 |
Product | hypothetical protein |
Protein accession | YP_869285 |
Protein GI | 117920093 |
COG category | |
COG ID | |
TIGRFAM ID | |
| ![](https://exploration.weizmann.ac.il/pandatox/images_new/ic_cp.jpg)
![](https://exploration.weizmann.ac.il/pandatox/images_new/ic_hh.jpg)
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Plasmid Coverage information |
Num covering plasmid clones | 14 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 19 |
Fosmid unclonability p-value | 0.402123 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGCGTCGAT TAAGTATTAT CGCGGCTGCC GTCGCACTCA GCGCCTGTGG TGGCGGTGGT GGGGAGAATA ATGATGGTGG TACAGTCACC CCACCAACCA CTAACGTGCC ACGCTGCACC ACAGTGGCTG CGCTCATCAC CACAGACTCA GGCGCCATCC GCTTTAAAAC TGAGCCCCAA TATGTGGTGG GACAATCCAG CGCCATTATT GCCAGCCTAG GGAATCGCGA TTCACAGGAT CTTACTTTCC GCTGGCAACA GTTAGAAGGA CCCAGCATTG AACTCGTGAG TCAAAATAGT CCAGTATTAG CCTTCGATAT TCCCACTGCA GGTAGCTACC GTTTTAGCCT ACATATCAGC GGCAGTAATA TCGATGAGAC TGGCGAAATA GCGATCAATG CCGACAGCAG CGCGGGGGCA ATGCTGAACA TTCGCCAAGA TCATCAAGCC GTTGAGGGTA ACGATGTCAG TCTACGAATC GCCCAGCAAG CGGGACTTAG TGCATCAAAC ATCAATTGGT GTATCGCCGA GGGCCCCAGT GTTAGTCTCG ATATCAGCGA TCCCTTTAGA CCCCTGTTTA CCGCGCCCAT TGTAGGTCAA GATACCTTAA CCCGCCTTAG GGCATCGGCC ACTATTAACG GTAATACCGT GACAGACGAA GCCTATGTGC TCACTACGGC ATCGCCCACG ATAAGCTCTA CCTACTTCGA TACACCCGTG GCTCGCACCC ACGCTTATAA CCCCGCCTCA CCTTATGCCA GTGCCTTAAC GAGCTGTGTG TACTCGAATC AGTTAAAAGA GGCTTGTACT ATCAACCAAT TGCCGCTTAT TGGCCAAGTC TCAAATACGC TCGATGTCGA TACAATTCTC GATCGTGTAT TAGTGTCCCA CGATTGGATG GGAGACAATT TCGCCGCGTT TTTACGTCAA ATGGACCCGA ACAGCGATTT CGCCCGCCTG CTACAATCGG TCACCGCCGT GGTGATAAGC TATGATGTGC GCCCCTCGTT TTATTGGGTC GTCACAGGGG CGATTTATCT CGACCCGAAT GATTTGTGGC TCACGCCAAC CCAGCGTGAC AGCATTAACG AGGCGCCGGA TTATCGCAGC GACTTTGGCA GTGAGCTCAA TTTCCTCATG CCGTGGCGTT ACGTTAAAAA TAACCAATAT GCTTCACAGG GATTCCCAAT CACGACGCGC GCCACCCGCA CGCTCAGCCA GATTAATCCC GATCTCGCCT CACTCTTGTA CCATGAGCTC GCCCACGCCA ATGACTTCTT CCCAAGAAGC ATTCACGCCA CGCTCACTGG CCCCAGATTG TTGGACGACT ATAGCCGCCG AAATGCCAAT AAGAGTTTGA TATCCGATCA AGTGAGTCGC AACTATCCCC TCACCAGTAC CGAAATGACA GGCCTTGCAG CGGTGAGCTT CTTGGGCGCC AAAGCCACTG CAACCCAAAA AGCCTATCAA CCCTCGGATG TGAGTACGTT TTTCTCCGGT GATATCGCCA ATGACTTTTA TAACTATTCC AGTACCCGTG AAGACGCGGC GATGTTATTC GAAGAAGCCA TGATGAGCTA TCGCTATCAA ATCCAGCGCG ATGTGGCCGT CACTAACCTG CCCGCCGTAC TCACGGCAGA TACAGTGATA GTTGACTGGG GACAAAGGGG ACGAATTGGT GATGATAGTC TGGCAAACCG CGCCGCCTTA GTGATCGATG GCATGCTGCC AGAGCTTGAC GGCATCAGCC TGCTCGCGAG CCTGCCCGAG CCCATTGCTA TGACTCAAGG CCAAAGCTGG CGCCAAACCC TGGGGATTTC ACCCAATACC ACAGTGAAAG GACTACAAGG AGTTGCGGCA AGTAGCGAAA CGCTTACCGA GCCAGAGCTG CGTTTCAGTG GCGATCGTCA CCGCCATCCA CAGCAGTGA
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Protein sequence | MRRLSIIAAA VALSACGGGG GENNDGGTVT PPTTNVPRCT TVAALITTDS GAIRFKTEPQ YVVGQSSAII ASLGNRDSQD LTFRWQQLEG PSIELVSQNS PVLAFDIPTA GSYRFSLHIS GSNIDETGEI AINADSSAGA MLNIRQDHQA VEGNDVSLRI AQQAGLSASN INWCIAEGPS VSLDISDPFR PLFTAPIVGQ DTLTRLRASA TINGNTVTDE AYVLTTASPT ISSTYFDTPV ARTHAYNPAS PYASALTSCV YSNQLKEACT INQLPLIGQV SNTLDVDTIL DRVLVSHDWM GDNFAAFLRQ MDPNSDFARL LQSVTAVVIS YDVRPSFYWV VTGAIYLDPN DLWLTPTQRD SINEAPDYRS DFGSELNFLM PWRYVKNNQY ASQGFPITTR ATRTLSQINP DLASLLYHEL AHANDFFPRS IHATLTGPRL LDDYSRRNAN KSLISDQVSR NYPLTSTEMT GLAAVSFLGA KATATQKAYQ PSDVSTFFSG DIANDFYNYS STREDAAMLF EEAMMSYRYQ IQRDVAVTNL PAVLTADTVI VDWGQRGRIG DDSLANRAAL VIDGMLPELD GISLLASLPE PIAMTQGQSW RQTLGISPNT TVKGLQGVAA SSETLTEPEL RFSGDRHRHP QQ
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