Gene Shewana3_1646 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagShewana3_1646 
Symbol 
ID4476101 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameShewanella sp. ANA-3 
KingdomBacteria 
Replicon accessionNC_008577 
Strand
Start bp1936816 
End bp1938744 
Gene Length1929 bp 
Protein Length642 aa 
Translation table11 
GC content53% 
IMG OID639726229 
Producthypothetical protein 
Protein accessionYP_869285 
Protein GI117920093 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones14 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones19 
Fosmid unclonability p-value0.402123 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGCGTCGAT TAAGTATTAT CGCGGCTGCC GTCGCACTCA GCGCCTGTGG TGGCGGTGGT 
GGGGAGAATA ATGATGGTGG TACAGTCACC CCACCAACCA CTAACGTGCC ACGCTGCACC
ACAGTGGCTG CGCTCATCAC CACAGACTCA GGCGCCATCC GCTTTAAAAC TGAGCCCCAA
TATGTGGTGG GACAATCCAG CGCCATTATT GCCAGCCTAG GGAATCGCGA TTCACAGGAT
CTTACTTTCC GCTGGCAACA GTTAGAAGGA CCCAGCATTG AACTCGTGAG TCAAAATAGT
CCAGTATTAG CCTTCGATAT TCCCACTGCA GGTAGCTACC GTTTTAGCCT ACATATCAGC
GGCAGTAATA TCGATGAGAC TGGCGAAATA GCGATCAATG CCGACAGCAG CGCGGGGGCA
ATGCTGAACA TTCGCCAAGA TCATCAAGCC GTTGAGGGTA ACGATGTCAG TCTACGAATC
GCCCAGCAAG CGGGACTTAG TGCATCAAAC ATCAATTGGT GTATCGCCGA GGGCCCCAGT
GTTAGTCTCG ATATCAGCGA TCCCTTTAGA CCCCTGTTTA CCGCGCCCAT TGTAGGTCAA
GATACCTTAA CCCGCCTTAG GGCATCGGCC ACTATTAACG GTAATACCGT GACAGACGAA
GCCTATGTGC TCACTACGGC ATCGCCCACG ATAAGCTCTA CCTACTTCGA TACACCCGTG
GCTCGCACCC ACGCTTATAA CCCCGCCTCA CCTTATGCCA GTGCCTTAAC GAGCTGTGTG
TACTCGAATC AGTTAAAAGA GGCTTGTACT ATCAACCAAT TGCCGCTTAT TGGCCAAGTC
TCAAATACGC TCGATGTCGA TACAATTCTC GATCGTGTAT TAGTGTCCCA CGATTGGATG
GGAGACAATT TCGCCGCGTT TTTACGTCAA ATGGACCCGA ACAGCGATTT CGCCCGCCTG
CTACAATCGG TCACCGCCGT GGTGATAAGC TATGATGTGC GCCCCTCGTT TTATTGGGTC
GTCACAGGGG CGATTTATCT CGACCCGAAT GATTTGTGGC TCACGCCAAC CCAGCGTGAC
AGCATTAACG AGGCGCCGGA TTATCGCAGC GACTTTGGCA GTGAGCTCAA TTTCCTCATG
CCGTGGCGTT ACGTTAAAAA TAACCAATAT GCTTCACAGG GATTCCCAAT CACGACGCGC
GCCACCCGCA CGCTCAGCCA GATTAATCCC GATCTCGCCT CACTCTTGTA CCATGAGCTC
GCCCACGCCA ATGACTTCTT CCCAAGAAGC ATTCACGCCA CGCTCACTGG CCCCAGATTG
TTGGACGACT ATAGCCGCCG AAATGCCAAT AAGAGTTTGA TATCCGATCA AGTGAGTCGC
AACTATCCCC TCACCAGTAC CGAAATGACA GGCCTTGCAG CGGTGAGCTT CTTGGGCGCC
AAAGCCACTG CAACCCAAAA AGCCTATCAA CCCTCGGATG TGAGTACGTT TTTCTCCGGT
GATATCGCCA ATGACTTTTA TAACTATTCC AGTACCCGTG AAGACGCGGC GATGTTATTC
GAAGAAGCCA TGATGAGCTA TCGCTATCAA ATCCAGCGCG ATGTGGCCGT CACTAACCTG
CCCGCCGTAC TCACGGCAGA TACAGTGATA GTTGACTGGG GACAAAGGGG ACGAATTGGT
GATGATAGTC TGGCAAACCG CGCCGCCTTA GTGATCGATG GCATGCTGCC AGAGCTTGAC
GGCATCAGCC TGCTCGCGAG CCTGCCCGAG CCCATTGCTA TGACTCAAGG CCAAAGCTGG
CGCCAAACCC TGGGGATTTC ACCCAATACC ACAGTGAAAG GACTACAAGG AGTTGCGGCA
AGTAGCGAAA CGCTTACCGA GCCAGAGCTG CGTTTCAGTG GCGATCGTCA CCGCCATCCA
CAGCAGTGA
 
Protein sequence
MRRLSIIAAA VALSACGGGG GENNDGGTVT PPTTNVPRCT TVAALITTDS GAIRFKTEPQ 
YVVGQSSAII ASLGNRDSQD LTFRWQQLEG PSIELVSQNS PVLAFDIPTA GSYRFSLHIS
GSNIDETGEI AINADSSAGA MLNIRQDHQA VEGNDVSLRI AQQAGLSASN INWCIAEGPS
VSLDISDPFR PLFTAPIVGQ DTLTRLRASA TINGNTVTDE AYVLTTASPT ISSTYFDTPV
ARTHAYNPAS PYASALTSCV YSNQLKEACT INQLPLIGQV SNTLDVDTIL DRVLVSHDWM
GDNFAAFLRQ MDPNSDFARL LQSVTAVVIS YDVRPSFYWV VTGAIYLDPN DLWLTPTQRD
SINEAPDYRS DFGSELNFLM PWRYVKNNQY ASQGFPITTR ATRTLSQINP DLASLLYHEL
AHANDFFPRS IHATLTGPRL LDDYSRRNAN KSLISDQVSR NYPLTSTEMT GLAAVSFLGA
KATATQKAYQ PSDVSTFFSG DIANDFYNYS STREDAAMLF EEAMMSYRYQ IQRDVAVTNL
PAVLTADTVI VDWGQRGRIG DDSLANRAAL VIDGMLPELD GISLLASLPE PIAMTQGQSW
RQTLGISPNT TVKGLQGVAA SSETLTEPEL RFSGDRHRHP QQ