Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Shewana3_1634 |
Symbol | nhaB |
ID | 4476598 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Shewanella sp. ANA-3 |
Kingdom | Bacteria |
Replicon accession | NC_008577 |
Strand | - |
Start bp | 1922960 |
End bp | 1924561 |
Gene Length | 1602 bp |
Protein Length | 533 aa |
Translation table | 11 |
GC content | 47% |
IMG OID | 639726217 |
Product | sodium/proton antiporter |
Protein accession | YP_869273 |
Protein GI | 117920081 |
COG category | [P] Inorganic ion transport and metabolism |
COG ID | [COG3067] Na+/H+ antiporter |
TIGRFAM ID | [TIGR00774] Na+/H+ antiporter NhaB |
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Plasmid Coverage information |
Num covering plasmid clones | 3 |
Plasmid unclonability p-value | 0.000708329 |
Plasmid hitchhiking | Yes |
Plasmid clonability | hitchhiker |
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Fosmid Coverage information |
Num covering fosmid clones | 16 |
Fosmid unclonability p-value | 0.136826 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGCCGATGA CAATGAGTCA GGCGTTTATT GGGAACTTCT TAGGGAATTC TCCTAAGTGG TACAAGATCG CAATACTGTC GTTTTTAATA ATCAATCCAA TACTCTTTTT CTATGTCAGC CCCTTTGTGG CTGGTTGGGT ATTAGTACTT GAGTTTATTT TTACCTTGGC AATGGCGCTA AAATGCTACC CATTACAACC CGGTGGTCTA TTAGCGATTG AAGCTGTCGC CATCGGCATG ACCTCAGCAA GCCAAGTGCT GCACGAAATT GAAGCGAACC TTGAAGTGCT ATTACTGCTG GTATTTATGG TGGCCGGCAT TTACTTCATG AAGCAGCTAC TGCTGTTTGT GTTCACTAAG ATGATCACTA AAGTACGTTC GAAAATCTTA GTGTCTTTGT TGTTCTGTCT AGCTTCCGCC TTCTTATCCG CCTTCTTAGA TGCGTTAACT GTTATCGCCG TGATTATCAC CGTGGCGGTT GGTTTTTACT CCATCTATCA CAAAGTCGCC TCAGGTAAAG ATTTCTCGGC CGATCATGAC CATACCTCCG AAGGCAAAAA TGACGATGGT GAAAATCAGC TCAACGAAGA CGAGCTGGAA TCCTTCCGTG GTTTCCTACG TAACCTGTTA ATGCACGCCG GTGTCGGTAC TGCATTGGGT GGCGTGTGTA CTATGGTGGG TGAACCGCAA AACTTAATTA TTGCAGCTCA AGCAAACTGG CAATTTGGCG AATTTGCGAT CCGTATGTCA CCTGTGACAG TGCCTGTATT GTTCGCAGGT ATCCTCACCT GCTTTATCGT CGAGAAATTC CGTTGGTTTG GTTATGGTGC CCAGCTTCCG GATGCGGTGC ATAAAATCCT ATGTGATTAC GCCGCCTATG AAGACGCACG TCGTACCAAC AAAGACAAGA TGAAGCTGGT TATCCAAGCC TTTGTGGGTG TGTGGTTGAT TGCGGGTCTC GCGCTGCACT TAGCGTCTGT GGGCTTGATT GGTCTGTCTG TGATCATCTT AACCACGGCC TTTAACGGTA TTACCGATGA GCATGCGCTA GGTAAAGCCT TCGAAGAAGC CCTGCCCTTT ACGGCCTTGT TAGCGGTGTT CTTTGCGGTT GTTGCCGTAA TCATCGACCA ACAACTGTTT GGCCCTGTCA TCCAATGGGC ACTAAACCAT GAAGGTAATA CCCAATTAGT GATCTTCTAT ATCGCTAACG GTTTACTCTC TATGGTCAGT GATAACGTGT TTGTGGGCAC GGTTTACATT AACGAGGTCA AAGCCGCCCT GATTAACGGT CAAATCACCC GGGATCAATT CGACCTGTTA GCAGTTGCGA TTAACACTGG TACTAACTTG CCTTCGGTGG CAACACCAAA CGGTCAAGCC GCATTCCTGT TCTTATTGAC CTCGGCTCTT GCACCGCTGA TCCGTTTATC CTACGGCAGA ATGGTTTGGA TGGCATTGCC CTACACTATC GTGCTATCGA TTGTGGGCGT GATGGCTATT CAATCGGGCT TCTTAGAGCA GATGACCCAG TACTTCTATG ACTCCCATGC AATATTGCAC CACAGTGTTA AAGAAGCGTT AGCGCCTGCT GCAGCTCACT AA
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Protein sequence | MPMTMSQAFI GNFLGNSPKW YKIAILSFLI INPILFFYVS PFVAGWVLVL EFIFTLAMAL KCYPLQPGGL LAIEAVAIGM TSASQVLHEI EANLEVLLLL VFMVAGIYFM KQLLLFVFTK MITKVRSKIL VSLLFCLASA FLSAFLDALT VIAVIITVAV GFYSIYHKVA SGKDFSADHD HTSEGKNDDG ENQLNEDELE SFRGFLRNLL MHAGVGTALG GVCTMVGEPQ NLIIAAQANW QFGEFAIRMS PVTVPVLFAG ILTCFIVEKF RWFGYGAQLP DAVHKILCDY AAYEDARRTN KDKMKLVIQA FVGVWLIAGL ALHLASVGLI GLSVIILTTA FNGITDEHAL GKAFEEALPF TALLAVFFAV VAVIIDQQLF GPVIQWALNH EGNTQLVIFY IANGLLSMVS DNVFVGTVYI NEVKAALING QITRDQFDLL AVAINTGTNL PSVATPNGQA AFLFLLTSAL APLIRLSYGR MVWMALPYTI VLSIVGVMAI QSGFLEQMTQ YFYDSHAILH HSVKEALAPA AAH
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